Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_113655 18 1935 NP_005890 18 1935 NP_114068 18 1935 NP_114064 18 1935 NP_001245356 18 1935 NP_001245355 18 1935 NP_001245357 18 1935 XP_006721966 18 1935 XP_006714863 18 1935 XP_006714862 18 1935 XP_005268578 18 1935 NP_001866 17 3301 NP_110424 17 3301 NP_001116105 17 3301 XP_005262687 17 3301 XP_006712171 17 3301 NP_001136087 17 4312 NP_001136086 17 4312 NP_065112 17 4312 NP_001275939 17 4312 XP_005264285 17 4312 XP_006712034 17 4312 XP_005264284 17 4312 XP_005264283 17 4312 XP_005264282 17 4312 NP_001136088 17 4312 NP_056067 17 4312 NP_001185797 16 5631 NP_005177 16 5631 NP_001185798 16 5631 NP_001167558 16 5631 NP_858045 16 5631 NP_006525 16 5631 NP_001167559 16 5631 NP_689914 16 5631 NP_001231 16 5631 XP_006718761 16 5631 NP_005623 16 7355 NP_877439 16 7355 NP_001957 16 7355 NP_653292 16 7355 XP_005255575 16 7355 XP_005255574 16 7355 XP_005255573 16 7355 XP_006720998 16 7355 XP_005255571 16 7355 XP_006720997 16 7355 XP_006720996 16 7355 XP_006720995 16 7355 XP_006720994 16 7355 NP_057653 15 9605 NP_005987 15 9605 NP_001010874 15 9605 NP_848611 15 9605 NP_001186867 15 9605 NP_872393 15 9605 XP_006722810 15 9605 XP_005272530 15 9605 XP_006722809 15 9605 XP_005265722 15 9605 XP_005265721 15 9605 XP_005265720 15 9605 XP_005265719 15 9605 XP_006712515 15 9605 XP_006712514 15 9605 XP_006712513 15 9605 XP_006712512 15 9605 XP_006712511 15 9605 XP_006712510 15 9605 XP_006712509 15 9605 XP_005246533 15 9605 XP_006712508 15 9605 NP_115893 15 9605 NP_940936 15 9605>NP_113655 Length = 959 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 221 VRLRNPVV 228>NP_005890 Length = 966 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRMRNPVVG 9 L++R PVVG Sbjct: 257 LKLRRPVVG 265>NP_114068 Length = 966 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRMRNPVVG 9 L++R PVVG Sbjct: 257 LKLRRPVVG 265>NP_114064 Length = 966 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRMRNPVVG 9 L++R PVVG Sbjct: 257 LKLRRPVVG 265>NP_001245356 Length = 896 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 221 VRLRNPVV 228>NP_001245355 Length = 945 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 221 VRLRNPVV 228>NP_001245357 Length = 983 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 245 VRLRNPVV 252>XP_006721966 Length = 896 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRMRNPVVG 9 L++R PVVG Sbjct: 257 LKLRRPVVG 265>XP_006714863 Length = 921 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 183 VRLRNPVV 190>XP_006714862 Length = 956 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 221 VRLRNPVV 228>XP_005268578 Length = 959 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRMRNPVV 8 +R+RNPVV Sbjct: 221 VRLRNPVV 228>NP_001866 Length = 1500 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 L M NP++G Sbjct: 94 LTMANPIIG 102>NP_110424 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 L+MRNP + Sbjct: 144 LKMRNPAI 151>NP_001116105 Length = 1506 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 L M NP++G Sbjct: 100 LTMANPIIG 108>XP_005262687 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 L+MRNP + Sbjct: 144 LKMRNPAI 151>XP_006712171 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 L+MRNP + Sbjct: 144 LKMRNPAI 151>NP_001136087 Length = 1160 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 928 RFRNPVV 934>NP_001136086 Length = 1196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 964 RFRNPVV 970>NP_065112 Length = 630 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RMRNPVVG 9 R+R+PV+G Sbjct: 151 RLRHPVLG 158>NP_001275939 Length = 590 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RMRNPVVG 9 R+R+PV+G Sbjct: 151 RLRHPVLG 158>XP_005264285 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 717 RFRNPVV 723>XP_006712034 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 963 RFRNPVV 969>XP_005264284 Length = 1196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 964 RFRNPVV 970>XP_005264283 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 999 RFRNPVV 1005>XP_005264282 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 999 RFRNPVV 1005>NP_001136088 Length = 1160 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 928 RFRNPVV 934>NP_056067 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R RNPVV Sbjct: 999 RFRNPVV 1005>NP_001185797 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 +RMRNP Sbjct: 292 IRMRNP 297>NP_005177 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 +RMRNP Sbjct: 292 IRMRNP 297>NP_001185798 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 +RMRNP Sbjct: 292 IRMRNP 297>NP_001167558 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRMRNPVVG 9 L+M NP G Sbjct: 1193 LKMENPTAG 1201>NP_858045 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRMRNPVVG 9 L+M NP G Sbjct: 1193 LKMENPTAG 1201>NP_006525 Length = 1420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRMRNPVVG 9 L+M NP G Sbjct: 1193 LKMENPTAG 1201>NP_001167559 Length = 1415 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRMRNPVVG 9 L+M NP G Sbjct: 1188 LKMENPTAG 1196>NP_689914 Length = 5058 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+RNPV+ Sbjct: 19 RLRNPVL 25>NP_001231 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 L+MR PV G Sbjct: 460 LKMRIPVAG 468>XP_006718761 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 +RMRNP Sbjct: 292 IRMRNP 297>NP_005623 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 733 LRLRNP 738>NP_877439 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RMRNPV 7 RM+NPV Sbjct: 816 RMKNPV 821>NP_001957 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 +R+RNP V Sbjct: 14 IRLRNPPV 21>NP_653292 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 279 LRLRNP 284>XP_005255575 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 733 LRLRNP 738>XP_005255574 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 733 LRLRNP 738>XP_005255573 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 733 LRLRNP 738>XP_006720998 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 801 LRLRNP 806>XP_005255571 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 759 LRLRNP 764>XP_006720997 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 771 LRLRNP 776>XP_006720996 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 800 LRLRNP 805>XP_006720995 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 801 LRLRNP 806>XP_006720994 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LRMRNP 6 LR+RNP Sbjct: 801 LRLRNP 806>NP_057653 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 L MR+PV+ Sbjct: 3 LSMRDPVI 10>NP_005987 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRMRNPVV 8 L MR+PV+ Sbjct: 3 LSMRDPVI 10>NP_001010874 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+R+PVV Sbjct: 177 RLRHPVV 183>NP_848611 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RMRNPVV 8 R+RNP V Sbjct: 576 RVRNPTV 582>NP_001186867 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MRNPVVG 9 +R+PV+G Sbjct: 285 LRHPVIG 291>NP_872393 Length = 3234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1250 RGRSPIVG 1257>XP_006722810 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 LR++NP G Sbjct: 459 LRLKNPQEG 467>XP_005272530 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 LR++NP G Sbjct: 465 LRLKNPQEG 473>XP_006722809 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 LR++NP G Sbjct: 484 LRLKNPQEG 492>XP_005265722 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+R+PVV Sbjct: 177 RLRHPVV 183>XP_005265721 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+R+PVV Sbjct: 177 RLRHPVV 183>XP_005265720 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+R+PVV Sbjct: 177 RLRHPVV 183>XP_005265719 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RMRNPVV 8 R+R+PVV Sbjct: 162 RLRHPVV 168>XP_006712515 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1248 RGRSPIVG 1255>XP_006712514 Length = 2496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>XP_006712513 Length = 3220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1149 RGRSPIVG 1156>XP_006712512 Length = 3237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>XP_006712511 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>XP_006712510 Length = 3305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>XP_006712509 Length = 3319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1248 RGRSPIVG 1255>XP_005246533 Length = 3323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>XP_006712508 Length = 3324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1253 RGRSPIVG 1260>NP_115893 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMRNPVVG 9 R R+P+VG Sbjct: 1255 RGRSPIVG 1262>NP_940936 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRMRNPVVG 9 LR++NP G Sbjct: 465 LRLKNPQEG 473Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.148 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 684,611 Number of extensions: 950 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |