Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005260825 17 2528 XP_006723661 17 2528 NP_001128558 17 3301 NP_003240 17 4312 NP_056466 16 5631 NP_001273769 16 5631 NP_005711 16 5631 XP_006717111 16 5631 XP_006717110 16 5631 XP_006717109 16 5631 XP_006717108 16 5631 XP_005251963 16 5631 XP_006715889 16 5631 XP_006715888 16 5631 NP_000266 16 7355 NP_001191055 16 7355 NP_006143 16 7355 NP_001191056 16 7355 NP_055872 16 7355 NP_067614 16 7355 NP_001191197 16 7355 NP_001671 16 7355 NP_542172 16 7355 XP_006720943 16 7355 XP_005268316 16 7355 XP_006719852 16 7355 XP_005266357 16 7355 XP_006719851 16 7355 XP_006719850 16 7355 XP_006719849 16 7355 XP_006719848 16 7355 XP_005266356 16 7355 XP_006719847 16 7355 XP_006719846 16 7355 XP_006719845 16 7355 XP_006719844 16 7355 XP_006719843 16 7355 XP_006719842 16 7355 XP_005253431 16 7355 XP_006719140 16 7355 XP_006719139 16 7355 XP_005253429 16 7355 XP_006719138 16 7355 XP_005253428 16 7355 XP_005253427 16 7355 XP_006718465 16 7355 NP_758857 15 9605 NP_001231293 15 9605 NP_001073948 15 9605 NP_056380 15 9605 NP_683721 15 9605 NP_001171164 15 9605 NP_004195 15 9605 XP_005248625 15 9605 XP_006714732 15 9605>XP_005260825 Length = 1923 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLSRSYRC 9 R+SR +RC Sbjct: 1906 RISRKFRC 1913>XP_006723661 Length = 1970 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLSRSYRC 9 R+SR +RC Sbjct: 1953 RISRKFRC 1960>NP_001128558 Length = 318 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRL R +RC Sbjct: 72 LRLRRRHRC 80>NP_003240 Length = 689 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRLSRSYR 8 LR+SR YR Sbjct: 519 LRMSRHYR 526>NP_056466 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 208 LRMLQCYRC 216>NP_001273769 Length = 599 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 227 LRMLQCYRC 235>NP_005711 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLSRSYRC 9 LR++R+ RC Sbjct: 93 LRINRAARC 101>XP_006717111 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 208 LRMLQCYRC 216>XP_006717110 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 208 LRMLQCYRC 216>XP_006717109 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 35 LRMLQCYRC 43>XP_006717108 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 208 LRMLQCYRC 216>XP_005251963 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LR+ + YRC Sbjct: 208 LRMLQCYRC 216>XP_006715889 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLSRSYRC 9 LR++R+ RC Sbjct: 93 LRINRAARC 101>XP_006715888 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLSRSYRC 9 LR++R+ RC Sbjct: 93 LRINRAARC 101>NP_000266 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS+ RC Sbjct: 166 LRLSKLRRC 174>NP_001191055 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>NP_006143 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>NP_001191056 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>NP_055872 Length = 4678 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>NP_067614 Length = 64 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LSRSYRC 9 LSR +RC Sbjct: 44 LSRRFRC 50>NP_001191197 Length = 144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LSRSYRC 9 LSR +RC Sbjct: 124 LSRRFRC 130>NP_001671 Length = 66 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LSRSYRC 9 LSR +RC Sbjct: 46 LSRRFRC 52>NP_542172 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LRLSRSY 7 LRLSR Y Sbjct: 228 LRLSRDY 234>XP_006720943 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 LSRSYRC 9 LSR Y C Sbjct: 36 LSREYHC 42>XP_005268316 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS+ RC Sbjct: 166 LRLSKLRRC 174>XP_006719852 Length = 4752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_005266357 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719851 Length = 4689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719850 Length = 4697 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719849 Length = 4703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719848 Length = 4737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_005266356 Length = 4755 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719847 Length = 4761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1431 LRLLRVYTC 1439>XP_006719846 Length = 4763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719845 Length = 4772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719844 Length = 4789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719843 Length = 4794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_006719842 Length = 4797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRLSRSYRC 9 LRL R Y C Sbjct: 1467 LRLLRVYTC 1475>XP_005253431 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_006719140 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 106 LRLSLGFKC 114>XP_006719139 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_005253429 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_006719138 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_005253428 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_005253427 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLSRSYRC 9 LRLS ++C Sbjct: 159 LRLSLGFKC 167>XP_006718465 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLSRSY 7 RLSRSY Sbjct: 233 RLSRSY 238>NP_758857 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LRLSRSY 7 LRL RSY Sbjct: 88 LRLCRSY 94>NP_001231293 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SRSYRC 9 SRSY C Sbjct: 241 SRSYSC 246>NP_001073948 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SRSYRC 9 SRSY C Sbjct: 554 SRSYSC 559>NP_056380 Length = 1812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RLSRSYRC 9 RLS +Y C Sbjct: 1020 RLSLNYEC 1027>NP_683721 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRLSRSYR 8 LRL R YR Sbjct: 501 LRLCRPYR 508>NP_001171164 Length = 1705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SRSYRC 9 SRSY C Sbjct: 554 SRSYSC 559>NP_004195 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRLSRSYR 8 LRL R YR Sbjct: 501 LRLCRPYR 508>XP_005248625 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SRSYRC 9 SRSY C Sbjct: 241 SRSYSC 246>XP_006714732 Length = 1633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SRSYRC 9 SRSY C Sbjct: 456 SRSYSC 461Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.142 0.462 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,331 Number of extensions: 695 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |