Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 20 509 NP_001257437 20 509 NP_006281 20 509 XP_005267176 20 509 NP_258428 16 5631 NP_001269221 16 5631 NP_009119 16 5631 NP_001269220 16 5631 NP_001269222 16 5631 XP_005252339 16 5631 NP_116198 16 5631 NP_001268669 16 7355 NP_005727 16 7355 NP_079411 16 7355 NP_001268668 16 7355 XP_006722614 16 7355 XP_005258412 16 7355 XP_005258411 16 7355 XP_005258409 16 7355 XP_005258408 16 7355 XP_006722613 16 7355 XP_005258407 16 7355 XP_005258406 16 7355 XP_005258405 16 7355 XP_005258404 16 7355 XP_005258403 16 7355 NP_079471 15 9605 NP_004288 15 9605 NP_835471 15 9605 NP_001269914 15 9605 NP_056985 15 9605 NP_001269945 15 9605 NP_001269944 15 9605 NP_001269943 15 9605 NP_001025036 15 9605 XP_005269741 15 9605 XP_006717813 15 9605 XP_006717812 15 9605 XP_006716560 15 9605 XP_006716559 15 9605 XP_006714210 15 9605 XP_006714209 15 9605 XP_006713692 15 9605 XP_006713691 15 9605 XP_006713690 15 9605 XP_006713689 15 9605 XP_006713688 15 9605 XP_006713687 15 9605>NP_001257436 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 LRKALFST+ Sbjct: 122 LRKALFSTL 130>NP_001257437 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 LRKALFST+ Sbjct: 122 LRKALFSTL 130>NP_006281 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 LRKALFST+ Sbjct: 122 LRKALFSTL 130>XP_005267176 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 LRKALFST+ Sbjct: 122 LRKALFSTL 130>NP_258428 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKALFSTI 9 RKALF T+ Sbjct: 423 RKALFGTM 430>NP_001269221 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +R+ALFS++ Sbjct: 210 MRRALFSSL 218>NP_009119 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +R+ALFS++ Sbjct: 210 MRRALFSSL 218>NP_001269220 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +R+ALFS++ Sbjct: 227 MRRALFSSL 235>NP_001269222 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +R+ALFS++ Sbjct: 122 MRRALFSSL 130>XP_005252339 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK LF+T Sbjct: 44 LRKVLFAT 51>NP_116198 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK LF+T Sbjct: 44 LRKVLFAT 51>NP_001268669 Length = 1622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>NP_005727 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRKALFSTI 9 LR+ LFS I Sbjct: 290 LRRTLFSNI 298>NP_079411 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>NP_001268668 Length = 1422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_006722614 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258412 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258411 Length = 1409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258409 Length = 1430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258408 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_006722613 Length = 1523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258407 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258406 Length = 1559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258405 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258404 Length = 1605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>XP_005258403 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRKALFS 7 LR+ALFS Sbjct: 123 LRRALFS 129>NP_079471 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK +FST Sbjct: 208 LRKFVFST 215>NP_004288 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KALFSTI 9 KALF TI Sbjct: 248 KALFKTI 254>NP_835471 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 81 KALFST 86>NP_001269914 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK +FST Sbjct: 42 LRKFVFST 49>NP_056985 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>NP_001269945 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 12 LRKALF 17>NP_001269944 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>NP_001269943 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>NP_001025036 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKALFSTI 9 LR+A+FS + Sbjct: 183 LRRAVFSDV 191>XP_005269741 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>XP_006717813 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>XP_006717812 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKALF 6 LRKALF Sbjct: 138 LRKALF 143>XP_006716560 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK +FST Sbjct: 42 LRKFVFST 49>XP_006716559 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKALFST 8 LRK +FST Sbjct: 98 LRKFVFST 105>XP_006714210 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +++A+FSTI Sbjct: 874 MQEAVFSTI 882>XP_006714209 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRKALFSTI 9 +++A+FSTI Sbjct: 913 MQEAVFSTI 921>XP_006713692 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 118 KALFST 123>XP_006713691 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 118 KALFST 123>XP_006713690 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 212 KALFST 217>XP_006713689 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 212 KALFST 217>XP_006713688 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 212 KALFST 217>XP_006713687 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KALFST 8 KALFST Sbjct: 212 KALFST 217Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.143 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,763 Number of extensions: 495 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |