Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 17 2528 XP_006718908 17 2528 XP_005271621 17 2528 XP_006718907 17 2528 XP_006718906 17 2528 XP_005271619 17 2528 XP_005271618 17 2528 NP_001165882 17 4312 NP_001165883 17 4312 NP_620409 17 4312 XP_006710999 17 4312 XP_006710998 17 4312 NP_057434 16 5631 NP_891989 16 5631 NP_065972 16 5631 NP_073572 16 5631 NP_891991 16 5631 NP_443161 16 5631 NP_115766 16 5631 XP_006720224 16 5631 XP_005267794 16 5631 XP_005267793 16 5631 XP_005267792 16 5631 XP_006720223 16 5631 XP_006710380 16 5631 XP_005245788 16 5631 XP_006710379 16 5631 XP_006710378 16 5631 NP_055654 16 7355 NP_055771 16 7355 NP_001258862 16 7355 NP_001264282 16 7355 NP_115558 16 7355 XP_005271517 16 7355 XP_006718857 16 7355 XP_005271516 16 7355 XP_005271515 16 7355 XP_005271514 16 7355 XP_005271513 16 7355 XP_005271512 16 7355 XP_005271511 16 7355 XP_006718856 16 7355 XP_006718855 16 7355 XP_006718854 16 7355 XP_006718853 16 7355 XP_005271510 16 7355 XP_005271509 16 7355 XP_006718852 16 7355 XP_006718851 16 7355 XP_005264389 16 7355 XP_005270453 16 7355 XP_005270452 16 7355 XP_005270451 16 7355 NP_006836 16 7355 NP_620059 15 9605 NP_001182226 15 9605 NP_001182225 15 9605 NP_064612 15 9605 XP_005267409 15 9605 XP_006720108 15 9605 XP_005273841 15 9605 XP_005273840 15 9605 XP_005273839 15 9605 XP_006718500 15 9605 XP_005272199 15 9605 NP_612480 15 9605 NP_055644 15 9605>NP_000042 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_006718908 Length = 1708 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 226 LRITQQK 232>XP_005271621 Length = 2708 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1226 LRITQQK 1232>XP_006718907 Length = 3050 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1568 LRITQQK 1574>XP_006718906 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_005271619 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_005271618 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>NP_001165882 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRITQQKN 8 LRIT+Q+N Sbjct: 407 LRITRQQN 414>NP_001165883 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRITQQKN 8 LRIT+Q+N Sbjct: 409 LRITRQQN 416>NP_620409 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRITQQKN 8 LRIT+Q+N Sbjct: 409 LRITRQQN 416>XP_006710999 Length = 463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRITQQKN 8 LRIT+Q+N Sbjct: 348 LRITRQQN 355>XP_006710998 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRITQQKN 8 LRIT+Q+N Sbjct: 409 LRITRQQN 416>NP_057434 Length = 1377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1076 LRVTQQEKE 1084>NP_891989 Length = 2046 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1789 LRVTQQEKE 1797>NP_065972 Length = 2133 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1789 LRVTQQEKE 1797>NP_073572 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 237 LRLEQQKQQ 245>NP_891991 Length = 2090 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1789 LRVTQQEKE 1797>NP_443161 Length = 1412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 +ITQ KNQ Sbjct: 1293 KITQLKNQ 1300Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQ+KN+ Sbjct: 730 ITQEKNR 736>NP_115766 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 RITQ+K Q Sbjct: 32 RITQRKKQ 39>XP_006720224 Length = 1276 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1076 LRVTQQEKE 1084>XP_005267794 Length = 1379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1035 LRVTQQEKE 1043>XP_005267793 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1046 LRVTQQEKE 1054>XP_005267792 Length = 1420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1076 LRVTQQEKE 1084>XP_006720223 Length = 1989 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+TQQ+ + Sbjct: 1789 LRVTQQEKE 1797>XP_006710380 Length = 1398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 +ITQ KNQ Sbjct: 1279 KITQLKNQ 1286Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQ+KN+ Sbjct: 752 ITQEKNR 758>XP_005245788 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 +ITQ KNQ Sbjct: 1315 KITQLKNQ 1322Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQ+KN+ Sbjct: 752 ITQEKNR 758>XP_006710379 Length = 1452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 +ITQ KNQ Sbjct: 1315 KITQLKNQ 1322Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQ+KN+ Sbjct: 752 ITQEKNR 758>XP_006710378 Length = 1478 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RITQQKNQ 9 +ITQ KNQ Sbjct: 1314 KITQLKNQ 1321Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQ+KN+ Sbjct: 752 ITQEKNR 758>NP_055654 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RITQQKN 8 RITQ KN Sbjct: 297 RITQYKN 303>NP_055771 Length = 1460 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 634 LRLHQQKEQ 642>NP_001258862 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 637 LRLHQQKEQ 645>NP_001264282 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RITQQKNQ 9 RITQ NQ Sbjct: 27 RITQTNNQ 34>NP_115558 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RITQQKNQ 9 +ITQ+KN+ Sbjct: 247 QITQRKNE 254>XP_005271517 Length = 1350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 524 LRLHQQKEQ 532>XP_006718857 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 608 LRLHQQKEQ 616>XP_005271516 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 611 LRLHQQKEQ 619>XP_005271515 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 611 LRLHQQKEQ 619>XP_005271514 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 637 LRLHQQKEQ 645>XP_005271513 Length = 1460 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 634 LRLHQQKEQ 642>XP_005271512 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 637 LRLHQQKEQ 645>XP_005271511 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 637 LRLHQQKEQ 645>XP_006718856 Length = 1976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1150 LRLHQQKEQ 1158>XP_006718855 Length = 1979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1153 LRLHQQKEQ 1161>XP_006718854 Length = 1999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1173 LRLHQQKEQ 1181>XP_006718853 Length = 2017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1199 LRLHQQKEQ 1207>XP_005271510 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1196 LRLHQQKEQ 1204>XP_005271509 Length = 2024 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1199 LRLHQQKEQ 1207>XP_006718852 Length = 2025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1199 LRLHQQKEQ 1207>XP_006718851 Length = 2025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKNQ 9 LR+ QQK Q Sbjct: 1199 LRLHQQKEQ 1207>XP_005264389 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+T+ K+Q Sbjct: 880 LRVTEPKDQ 888>XP_005270453 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRITQQKN 8 LRIT Q+N Sbjct: 66 LRITAQEN 73>XP_005270452 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRITQQKN 8 LRIT Q+N Sbjct: 120 LRITAQEN 127>XP_005270451 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRITQQKN 8 LRIT Q+N Sbjct: 111 LRITAQEN 118>NP_006836 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRITQQKN 8 LRIT Q+N Sbjct: 120 LRITAQEN 127>NP_620059 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_001182226 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_001182225 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_064612 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKNQ 9 LR+ Q+K+Q Sbjct: 108 LRVEQRKHQ 116>XP_005267409 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQQ+N+ Sbjct: 343 ITQQQNE 349>XP_006720108 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITQQKNQ 9 ITQQ+N+ Sbjct: 379 ITQQQNE 385>XP_005273841 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273840 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273839 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_006718500 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005272199 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRITQQKN 8 LRI QKN Sbjct: 857 LRINAQKN 864>NP_612480 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>NP_055644 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRITQQKN 8 LRI QKN Sbjct: 857 LRINAQKN 864Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.123 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,534 Number of extensions: 699 Number of successful extensions: 72 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |