Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 390 NP_005913 20 390 XP_005267046 20 390 XP_005267045 20 390 NP_004230 17 2528 XP_005268272 17 2528 XP_005268271 17 2528 XP_005268270 17 2528 XP_006720384 17 2528 NP_001027559 17 3301 NP_001027558 17 3301 NP_000447 17 3301 XP_005269169 17 3301 NP_775759 17 4312 NP_001275933 17 4312 NP_001275931 17 4312 NP_851322 17 4312 XP_005271931 17 4312 NP_001004700 16 5631 NP_077277 16 7355 NP_001034974 16 7355 NP_001245221 16 7355 NP_001129493 16 7355 NP_079204 16 7355 XP_006723438 16 7355 XP_005259307 16 7355 XP_006723437 16 7355 XP_005259306 16 7355 XP_006723436 16 7355 XP_005259304 16 7355 XP_005259305 16 7355 XP_006718040 16 7355 XP_006718039 16 7355 NP_003477 15 9605 NP_055146 15 9605 NP_998765 15 9605 NP_001269845 15 9605 NP_055085 15 9605 NP_001229965 15 9605 NP_055495 15 9605 NP_001119807 15 9605 NP_001269848 15 9605 NP_116182 15 9605 NP_078988 15 9605 NP_001233 15 9605 NP_001073863 15 9605 NP_001129965 15 9605 NP_001274738 15 9605 NP_001274737 15 9605 NP_075048 15 9605 XP_006722261 15 9605 XP_005258130 15 9605 XP_005251258 15 9605 XP_006716508 15 9605 XP_005251256 15 9605 XP_006716507 15 9605 XP_005251255 15 9605 XP_005251254 15 9605 XP_005251253 15 9605 XP_005251252 15 9605 XP_005251250 15 9605 XP_006716506 15 9605 XP_005251246 15 9605 XP_005262932 15 9605 XP_005271342 15 9605>NP_006715 Length = 1558 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LRIMGTV+G Sbjct: 407 LRIMGTVLG 415>NP_005913 Length = 1608 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LRIMGTV+G Sbjct: 407 LRIMGTVLG 415>XP_005267046 Length = 1554 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LRIMGTV+G Sbjct: 407 LRIMGTVLG 415>XP_005267045 Length = 1604 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LRIMGTV+G Sbjct: 407 LRIMGTVLG 415>NP_004230 Length = 1979 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LR+MG+++G Sbjct: 1803 LRLMGSILG 1811>XP_005268272 Length = 969 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LR+MG+++G Sbjct: 793 LRLMGSILG 801>XP_005268271 Length = 1537 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LR+MG+++G Sbjct: 1361 LRLMGSILG 1369>XP_005268270 Length = 1950 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LR+MG+++G Sbjct: 1774 LRLMGSILG 1782>XP_006720384 Length = 1978 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIMGTVVG 9 LR+MG+++G Sbjct: 1802 LRLMGSILG 1810>NP_001027559 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIMGTVVG 9 R+MGT++G Sbjct: 56 RVMGTLLG 63>NP_001027558 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIMGTVVG 9 R+MGT++G Sbjct: 56 RVMGTLLG 63>NP_000447 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIMGTVVG 9 R+MGT++G Sbjct: 56 RVMGTLLG 63>XP_005269169 Length = 552 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIMGTVVG 9 R+MGT++G Sbjct: 63 RVMGTLLG 70>NP_775759 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIMGTVVG 9 LRI GT+ G Sbjct: 623 LRIFGTIPG 631>NP_001275933 Length = 657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIMGTVVG 9 LRI GT+ G Sbjct: 561 LRIFGTIPG 569>NP_001275931 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIMGTVVG 9 LRI GT+ G Sbjct: 623 LRIFGTIPG 631>NP_851322 Length = 724 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 LR++GT+ G Sbjct: 622 LRLLGTIPG 630>XP_005271931 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIMGTVVG 9 LRI GT+ G Sbjct: 623 LRIFGTIPG 631>NP_001004700 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MGTVVG 9 MGTVVG Sbjct: 34 MGTVVG 39>NP_077277 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>NP_001034974 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>NP_001245221 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRIMGTV 7 LRIMG+V Sbjct: 15 LRIMGSV 21>NP_001129493 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LRIMGTV 7 LRIMG+V Sbjct: 15 LRIMGSV 21>NP_079204 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 ++GTV+G Sbjct: 59 VLGTVIG 65>XP_006723438 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_005259307 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_006723437 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_005259306 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_006723436 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_005259304 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_005259305 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RIMGTVVG 9 R GTVVG Sbjct: 295 RCFGTVVG 302>XP_006718040 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 ++GTV+G Sbjct: 59 VLGTVIG 65>XP_006718039 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 ++GTV+G Sbjct: 59 VLGTVIG 65>NP_003477 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 59 IVGTIIG 65>NP_055146 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 53 IIGTIIG 59>NP_998765 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIMGTVVG 9 LRI GT+ G Sbjct: 183 LRIQGTLRG 191>NP_001269845 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 709 VQGTVVG 715>NP_055085 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 39 IVGTIIG 45>NP_001229965 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 39 IVGTIIG 45>NP_055495 Length = 2235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIMGTVVG 9 R+MG +VG Sbjct: 1040 RLMGRLVG 1047>NP_001119807 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 39 IVGTIIG 45>NP_001269848 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 719 VQGTVVG 725>NP_116182 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 + ++GTV+G Sbjct: 189 VEVLGTVLG 197>NP_078988 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LRIMGTVV 8 L+I+GT++ Sbjct: 179 LQILGTII 186>NP_001233 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 L ++GT+VG Sbjct: 9 LCVLGTLVG 17>NP_001073863 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 779 VQGTVVG 785>NP_001129965 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 + ++GTV+G Sbjct: 202 VEVLGTVLG 210>NP_001274738 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 + ++GTV+G Sbjct: 152 VEVLGTVLG 160>NP_001274737 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 + ++GTV+G Sbjct: 33 VEVLGTVLG 41>NP_075048 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 ++GTVVG Sbjct: 498 LVGTVVG 504>XP_006722261 Length = 2092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIMGTVVG 9 R+MG +VG Sbjct: 897 RLMGRLVG 904>XP_005258130 Length = 2234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIMGTVVG 9 R+MG +VG Sbjct: 1040 RLMGRLVG 1047>XP_005251258 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 284 VQGTVVG 290>XP_006716508 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 417 VQGTVVG 423>XP_005251256 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 468 VQGTVVG 474>XP_006716507 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 529 VQGTVVG 535>XP_005251255 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 529 VQGTVVG 535>XP_005251254 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 605 VQGTVVG 611>XP_005251253 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 606 VQGTVVG 612>XP_005251252 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 615 VQGTVVG 621>XP_005251250 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 779 VQGTVVG 785>XP_006716506 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 719 VQGTVVG 725>XP_005251246 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IMGTVVG 9 + GTVVG Sbjct: 779 VQGTVVG 785>XP_005262932 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IMGTVVG 9 I+GT++G Sbjct: 53 IIGTIIG 59>XP_005271342 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LRIMGTVVG 9 + ++GTV+G Sbjct: 187 VEVLGTVLG 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.154 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,648 Number of extensions: 640 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |