Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_001185763 18 1135 NP_055459 18 1135 XP_006726436 18 1135 XP_006726410 18 1135 XP_006711784 18 1135 XP_006711719 18 1135 XP_006711718 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711712 18 1135 XP_006711711 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 XP_005277503 18 1135 XP_005273038 18 1135 XP_006711708 18 1135 XP_005277500 18 1135 XP_006711707 18 1135 XP_005277499 18 1135 XP_006711706 18 1135 XP_006711705 18 1135 XP_006711164 18 1135 XP_005276114 18 1135 XP_006710122 18 1135 XP_005265253 17 3301 NP_886552 17 3301 NP_878918 15 9605 NP_055995 15 9605 NP_001248348 15 9605 NP_004624 15 9605 NP_002575 15 9605 NP_001128726 15 9605 NP_039236 15 9605 NP_065878 15 9605 NP_001245275 15 9605 XP_005259257 15 9605 XP_005267517 15 9605 XP_005267516 15 9605 XP_005267515 15 9605 XP_005267514 15 9605 XP_005267513 15 9605 XP_005267512 15 9605 XP_005267511 15 9605 XP_005263212 15 9605 XP_005263211 15 9605 XP_006712799 15 9605 XP_006712798 15 9605 XP_006712797 15 9605 XP_005245941 15 9605 NP_003361 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2176 LRTKVSKQE 2184>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2282 LRTKVSKQE 2290>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2282 LRTKVSKQE 2290>XP_006726436 Length = 178 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 60 LRTKVSKQE 68>XP_006726410 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2023 LRTKVSKQE 2031>XP_006711784 Length = 178 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 60 LRTKVSKQE 68>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2238 LRTKVSKQE 2246>XP_006711718 Length = 1436 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 1289 LRTKVSKQE 1297>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2238 LRTKVSKQE 2246>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2347 LRTKVSKQE 2355>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2281 LRTKVSKQE 2289>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2282 LRTKVSKQE 2290>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2285 LRTKVSKQE 2293>XP_006711712 Length = 2473 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2326 LRTKVSKQE 2334>XP_006711711 Length = 2482 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2335 LRTKVSKQE 2343>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2347 LRTKVSKQE 2355>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2348 LRTKVSKQE 2356>XP_005277503 Length = 2498 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2445 LRTKVSKQE 2453>XP_005273038 Length = 2509 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2445 LRTKVSKQE 2453>XP_006711708 Length = 2512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2365 LRTKVSKQE 2373>XP_005277500 Length = 2525 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2445 LRTKVSKQE 2453>XP_006711707 Length = 2553 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2406 LRTKVSKQE 2414>XP_005277499 Length = 2561 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2445 LRTKVSKQE 2453>XP_006711706 Length = 2591 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2444 LRTKVSKQE 2452>XP_006711705 Length = 2592 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2445 LRTKVSKQE 2453>XP_006711164 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 2023 LRTKVSKQE 2031>XP_005276114 Length = 134 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 30 LRTKVSKQE 38>XP_006710122 Length = 126 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 LR KVSKQE Sbjct: 60 LRTKVSKQE 68>XP_005265253 Length = 434 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIKVSKQE 9 LR+K++K+E Sbjct: 311 LRLKIAKEE 319>NP_886552 Length = 434 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRIKVSKQE 9 LR+K++K+E Sbjct: 311 LRLKIAKEE 319>NP_878918 Length = 6907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>NP_055995 Length = 6885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>NP_001248348 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 226 LRIKKKKEE 234>NP_004624 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 226 LRIKKKKEE 234>NP_002575 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 160 LRIKFGKKE 168>NP_001128726 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 160 LRIKFGKKE 168>NP_039236 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 158 LRIKFGKKE 166>NP_065878 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RIKVSKQE 9 ++K+ KQE Sbjct: 278 KVKIKKQE 285>NP_001245275 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIKVSKQE 9 ++IK+SK E Sbjct: 191 IKIKISKGE 199>XP_005259257 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVSKQE 9 KVSKQE Sbjct: 237 KVSKQE 242>XP_005267517 Length = 6883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5864 LRVAIRKQE 5872>XP_005267516 Length = 6884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005267515 Length = 6899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005267514 Length = 6908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005267513 Length = 6921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005267512 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005267511 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LR+ + KQE Sbjct: 5903 LRVAIRKQE 5911>XP_005263212 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RIKVSKQE 9 ++K+ KQE Sbjct: 278 KVKIKKQE 285>XP_005263211 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RIKVSKQE 9 ++K+ KQE Sbjct: 278 KVKIKKQE 285>XP_006712799 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 251 LRIKKKKEE 259>XP_006712798 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 141 LRIKKKKEE 149>XP_006712797 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 226 LRIKKKKEE 234>XP_005245941 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIKVSKQE 9 LRIK K+E Sbjct: 158 LRIKFGKKE 166>NP_003361 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVSKQE 9 KVSKQE Sbjct: 237 KVSKQE 242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.128 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,488 Number of extensions: 767 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |