Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1935 XP_005248577 18 1935 XP_005248576 18 1935 NP_060064 17 3301 NP_207837 16 5631 NP_055747 16 5631 XP_005247294 16 5631 XP_005247293 16 5631 XP_005247292 16 5631 XP_005247291 16 5631 XP_005247290 16 5631 XP_006713603 16 5631 XP_005247289 16 5631 NP_620481 16 5631 NP_000248 16 7355 NP_001274675 16 7355 NP_001136105 16 7355 NP_004470 16 7355 NP_000704 16 7355 NP_055123 16 7355 NP_001035865 16 7355 NP_003326 16 7355 NP_001238784 16 7355 NP_001238780 16 7355 NP_001238781 16 7355 NP_061909 16 7355 NP_001274670 16 7355 NP_001238782 16 7355 XP_005256637 16 7355 XP_005256636 16 7355 XP_005267754 16 7355 XP_005267753 16 7355 XP_006716351 16 7355 XP_005265487 16 7355 XP_006713384 16 7355 NP_543148 16 7355 NP_060816 16 7355 NP_570629 15 9605 NP_001034439 15 9605 NP_001927 15 9605 NP_001277181 15 9605 NP_001258825 15 9605 NP_001258824 15 9605 NP_079426 15 9605 NP_056355 15 9605 NP_057340 15 9605 XP_006720533 15 9605 XP_006720532 15 9605 XP_005254354 15 9605 XP_005254211 15 9605 XP_005254210 15 9605 XP_006720446 15 9605 XP_005254209 15 9605 XP_005254208 15 9605 XP_005252741 15 9605 XP_006715935 15 9605 XP_006715934 15 9605 XP_006711619 15 9605 XP_006711618 15 9605 NP_003983 15 9605 NP_001123500 15 9605 NP_005584 15 9605 NP_001012526 15 9605>NP_005912 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 LRIA FGAA Sbjct: 1384 LRIADFGAA 1392>XP_005248577 Length = 1349 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 LRIA FGAA Sbjct: 1221 LRIADFGAA 1229>XP_005248576 Length = 1375 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 LRIA FGAA Sbjct: 1247 LRIADFGAA 1255>NP_060064 Length = 199 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RIAVFGA 8 R+AVFGA Sbjct: 9 RVAVFGA 15>NP_207837 Length = 1308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIAVFGAA 9 +RI VFG A Sbjct: 170 MRIEVFGCA 178>NP_055747 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247294 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 101 LRITVFGS 108>XP_005247293 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247292 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247291 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247290 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 273 LRITVFGS 280>XP_006713603 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 273 LRITVFGS 280>XP_005247289 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LRI VFG+ Sbjct: 273 LRITVFGS 280>NP_620481 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIAVFGAA 9 +RI VFG A Sbjct: 145 MRIEVFGCA 153>NP_000248 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 +AVFGAA Sbjct: 6 MAVFGAA 12>NP_001274675 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 I+VFGAA Sbjct: 40 ISVFGAA 46>NP_001136105 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>NP_004470 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIAVFGAA 9 LR+ VFG A Sbjct: 197 LRVDVFGRA 205>NP_000704 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RIAVFGA 8 +IA+FGA Sbjct: 5 KIAIFGA 11>NP_055123 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>NP_001035865 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 I+VFGAA Sbjct: 139 ISVFGAA 145>NP_003326 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RIAVFGA 8 +IAVFGA Sbjct: 418 QIAVFGA 424>NP_001238784 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_001238780 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_001238781 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_061909 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 I+VFGAA Sbjct: 169 ISVFGAA 175>NP_001274670 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 I+VFGAA Sbjct: 107 ISVFGAA 113>NP_001238782 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>XP_005256637 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>XP_005256636 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>XP_005267754 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 +AVFGAA Sbjct: 6 MAVFGAA 12>XP_005267753 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IAVFGAA 9 +AVFGAA Sbjct: 6 MAVFGAA 12>XP_006716351 Length = 865 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 L++AVFG Sbjct: 603 LKVAVFG 609>XP_005265487 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RIAVFGA 8 +IAVFGA Sbjct: 418 QIAVFGA 424>XP_006713384 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RIAVFGA 8 +IAVFGA Sbjct: 418 QIAVFGA 424>NP_543148 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 L++AVFG Sbjct: 691 LKVAVFG 697>NP_060816 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RIAVFGAA 9 R+A FGAA Sbjct: 141 RLAEFGAA 148>NP_570629 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 705 RVAVFG 710>NP_001034439 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 641 RVAVFG 646>NP_001927 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 643 RVAVFG 648>NP_001277181 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 598 RVAVFG 603>NP_001258825 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+A FGA Sbjct: 298 LRLADFGA 305>NP_001258824 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+A FGA Sbjct: 346 LRLADFGA 353>NP_079426 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+A FGA Sbjct: 428 LRLADFGA 435>NP_056355 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 LR+A+FG Sbjct: 1244 LRLALFG 1250>NP_057340 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 LR+A+FG Sbjct: 11 LRLALFG 17>XP_006720533 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 LR+A+FG Sbjct: 949 LRLALFG 955>XP_006720532 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 LR+A+FG Sbjct: 1184 LRLALFG 1190>XP_005254354 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRIAVFG 7 LR+A+FG Sbjct: 1244 LRLALFG 1250>XP_005254211 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 95 IRVADFGSA 103>XP_005254210 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 316 IRVADFGSA 324>XP_006720446 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 330 IRVADFGSA 338>XP_005254209 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 330 IRVADFGSA 338>XP_005254208 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 478 IRVADFGSA 486>XP_005252741 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIAVFGAA 9 LR+A GAA Sbjct: 64 LRVAAAGAA 72>XP_006715935 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 644 RVAVFG 649>XP_006715934 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RIAVFG 7 R+AVFG Sbjct: 644 RVAVFG 649>XP_006711619 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+A FGA Sbjct: 379 LRLADFGA 386>XP_006711618 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRIAVFGA 8 LR+A FGA Sbjct: 428 LRLADFGA 435>NP_003983 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 316 IRVADFGSA 324>NP_001123500 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRIAVFGAA 9 +R+A FG+A Sbjct: 464 IRVADFGSA 472>NP_005584 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RIAVFGA 8 R+A FGA Sbjct: 35 RVAAFGA 41>NP_001012526 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRIAVFGAA 9 LR+A GAA Sbjct: 64 LRVAAAGAA 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.150 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 337,296 Number of extensions: 494 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |