Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_115803                                                              20     509
NP_001243257                                                           18    1482
NP_938406                                                              18    1482
NP_938191                                                              18    1482
NP_061496                                                              18    1482
NP_938197                                                              18    1482
NP_938200                                                              18    1482
NP_001243262                                                           18    1482
NP_938194                                                              18    1482
NP_001243289                                                           18    1482
NP_938202                                                              18    1482
NP_938199                                                              18    1482
NP_938192                                                              18    1482
NP_001243255                                                           18    1482
NP_938193                                                              18    1482
NP_001243290                                                           18    1482
NP_001243258                                                           18    1482
NP_001243254                                                           18    1482
NP_938201                                                              18    1482
NP_001243263                                                           18    1482
NP_001243261                                                           18    1482
NP_001243259                                                           18    1482
NP_938190                                                              18    1482
NP_938196                                                              18    1482
NP_938198                                                              18    1482
NP_001243256                                                           18    1482
NP_001243260                                                           18    1482
NP_001243288                                                           18    1482
NP_001243253                                                           18    1482
XP_006722224                                                           18    1482
XP_006722223                                                           18    1482
NP_955373                                                              17    2528
NP_001004470                                                           17    2528
XP_006723268                                                           17    2528
XP_005259506                                                           17    2528
XP_006723267                                                           17    2528
NP_003897                                                              17    3301
XP_006724128                                                           17    3301
XP_006724127                                                           17    3301
XP_005261262                                                           17    3301
XP_005261261                                                           17    3301
XP_005261263                                                           17    3301
XP_005261260                                                           17    3301
XP_006710239                                                           17    3301
NP_003651                                                              17    4312
XP_006723513                                                           17    4312
XP_006710433                                                           16    5631
XP_006710432                                                           16    5631
XP_006710431                                                           16    5631
XP_006710430                                                           16    5631
XP_006710429                                                           16    5631
NP_859070                                                              16    7355
XP_005245884                                                           16    7355
XP_005245882                                                           16    7355
XP_006710614                                                           16    7355
XP_005245881                                                           16    7355
XP_005245880                                                           16    7355
XP_006710613                                                           16    7355
XP_005245879                                                           16    7355
NP_001258625                                                           15    9605
NP_001258627                                                           15    9605
NP_004290                                                              15    9605
NP_000013                                                              15    9605
NP_065785                                                              15    9605
NP_115582                                                              15    9605
NP_699197                                                              15    9605
NP_001017987                                                           15    9605
NP_001229769                                                           15    9605
NP_001014980                                                           15    9605
XP_005260293                                                           15    9605
XP_006723742                                                           15    9605
XP_006721363                                                           15    9605
XP_005256258                                                           15    9605
XP_005256257                                                           15    9605
XP_005256256                                                           15    9605
XP_005256255                                                           15    9605
XP_006721362                                                           15    9605
XP_006721361                                                           15    9605
XP_005256254                                                           15    9605
XP_005256253                                                           15    9605
XP_005256252                                                           15    9605
XP_005256251                                                           15    9605
XP_006721360                                                           15    9605
XP_005256250                                                           15    9605
XP_006719191                                                           15    9605
XP_006719190                                                           15    9605
XP_006719189                                                           15    9605
XP_006719188                                                           15    9605
XP_006719187                                                           15    9605
XP_006719186                                                           15    9605
XP_006719185                                                           15    9605
XP_006719184                                                           15    9605
XP_006719183                                                           15    9605
XP_006719182                                                           15    9605
XP_006719181                                                           15    9605
XP_006719180                                                           15    9605
XP_006719179                                                           15    9605
XP_005264819                                                           15    9605
XP_006713309                                                           15    9605
XP_005273163                                                           15    9605
XP_005273162                                                           15    9605
XP_005273160                                                           15    9605
NP_057259                                                              15    9605
>NP_115803
          Length = 1156

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  LRARIAVC 8
          LRARIAVC
Sbjct: 40 LRARIAVC 47
>NP_001243257
          Length = 2259

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938406
          Length = 2343

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_938191
          Length = 2366

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_061496
          Length = 2377

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938197
          Length = 2306

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_938200
          Length = 2266

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243262
          Length = 2205

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938194
          Length = 2321

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243289
          Length = 2248

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938202
          Length = 2243

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_938199
          Length = 2332

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938192
          Length = 2273

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243255
          Length = 2287

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938193
          Length = 2298

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_001243290
          Length = 2246

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243258
          Length = 2250

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243254
          Length = 2291

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938201
          Length = 2250

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_001243263
          Length = 2194

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243261
          Length = 2227

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_001243259
          Length = 2239

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_938190
          Length = 2171

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_938196
          Length = 2261

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_938198
          Length = 2284

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243256
          Length = 2277

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243260
          Length = 2232

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243288
          Length = 2257

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>NP_001243253
          Length = 2314

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1240 IRARLPACC 1248
>XP_006722224
          Length = 2244

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1200 IRARLPACC 1208
>XP_006722223
          Length = 2268

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LRARIAVCC 9
            +RAR+  CC
Sbjct: 1217 IRARLPACC 1225
>NP_955373
          Length = 920

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   RARIAVCC 9
           RAR A CC
Sbjct: 254 RARQAACC 261
>NP_001004470
          Length = 398

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RARIAVCC 9
           RA++A CC
Sbjct: 126 RAKLASCC 133
>XP_006723268
          Length = 920

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   RARIAVCC 9
           RAR A CC
Sbjct: 254 RARQAACC 261
>XP_005259506
          Length = 933

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   RARIAVCC 9
           RAR A CC
Sbjct: 267 RARQAACC 274
>XP_006723267
          Length = 947

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   RARIAVCC 9
           RAR A CC
Sbjct: 281 RARQAACC 288
>NP_003897
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_006724128
          Length = 1483

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RARIAVCC 9
           R R+A CC
Sbjct: 705 RVRVARCC 712
>XP_006724127
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_005261262
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_005261261
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_005261263
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_005261260
          Length = 1980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RARIAVCC 9
            R R+A CC
Sbjct: 1202 RVRVARCC 1209
>XP_006710239
          Length = 485

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   LRARIAVC 8
           LR+R++VC
Sbjct: 339 LRSRVSVC 346
>NP_003651
          Length = 1194

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LRARIAVCC 9
           LR R+AV C
Sbjct: 252 LRERLAVLC 260
>XP_006723513
          Length = 1185

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LRARIAVCC 9
           LR R+AV C
Sbjct: 252 LRERLAVLC 260
>XP_006710433
          Length = 1169

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2   RARIAVCC 9
           RAR   CC
Sbjct: 326 RARTTCCC 333
>XP_006710432
          Length = 1202

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2   RARIAVCC 9
           RAR   CC
Sbjct: 326 RARTTCCC 333
>XP_006710431
          Length = 1205

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2   RARIAVCC 9
           RAR   CC
Sbjct: 326 RARTTCCC 333
>XP_006710430
          Length = 1226

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2   RARIAVCC 9
           RAR   CC
Sbjct: 326 RARTTCCC 333
>XP_006710429
          Length = 1238

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2   RARIAVCC 9
           RAR   CC
Sbjct: 326 RARTTCCC 333
>NP_859070
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_005245884
          Length = 594

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_005245882
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_006710614
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_005245881
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_005245880
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_006710613
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>XP_005245879
          Length = 634

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           RAR+ VC
Sbjct: 133 RARVLVC 139
>NP_001258625
          Length = 752

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LRARIAV 7
           LRAR+A+
Sbjct: 136 LRARVAI 142
>NP_001258627
          Length = 726

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LRARIAV 7
           LRAR+A+
Sbjct: 110 LRARVAI 116
>NP_004290
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LRARIAV 7
           LRAR+A+
Sbjct: 137 LRARVAI 143
>NP_000013
          Length = 363

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LRARIAVCC 9
           ++AR  +CC
Sbjct: 146 VKARSILCC 154
>NP_065785
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>NP_115582
          Length = 1866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>NP_699197
          Length = 3571

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 4 RIAVCC 9
         R+A CC
Sbjct: 4 RLAFCC 9
>NP_001017987
          Length = 288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2  RARIAVCC 9
          R+R+  CC
Sbjct: 6  RSRVLRCC 13
>NP_001229769
          Length = 241

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           R R+AVC
Sbjct: 189 RLRLAVC 195
>NP_001014980
          Length = 302

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LRARIAVC 8
           LRAR  VC
Sbjct: 224 LRARDVVC 231
>XP_005260293
          Length = 339

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LRARIAVCC 9
           ++AR  +CC
Sbjct: 146 VKARSILCC 154
>XP_006723742
          Length = 354

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LRARIAVCC 9
           ++AR  +CC
Sbjct: 146 VKARSILCC 154
>XP_006721363
          Length = 1385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256258
          Length = 1397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256257
          Length = 1405

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256256
          Length = 1427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256255
          Length = 1809

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_006721362
          Length = 1810

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_006721361
          Length = 1836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256254
          Length = 1837

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256253
          Length = 1838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 763 ARVAVTC 769
>XP_005256252
          Length = 1865

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256251
          Length = 1866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_006721360
          Length = 1866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_005256250
          Length = 1866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARIAVCC 9
           AR+AV C
Sbjct: 791 ARVAVTC 797
>XP_006719191
          Length = 287

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719190
          Length = 307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719189
          Length = 307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719188
          Length = 307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719187
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719186
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719185
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719184
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719183
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719182
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719181
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719180
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_006719179
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  LRARIAVCC 9
          LRA  A CC
Sbjct: 27 LRALKAKCC 35
>XP_005264819
          Length = 1128

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   LRARIAVCC 9
           LRAR  + C
Sbjct: 198 LRARYLIAC 206
>XP_006713309
          Length = 1151

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   LRARIAVCC 9
           LRAR  + C
Sbjct: 198 LRARYLIAC 206
>XP_005273163
          Length = 220

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           R R+AVC
Sbjct: 168 RLRLAVC 174
>XP_005273162
          Length = 220

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           R R+AVC
Sbjct: 168 RLRLAVC 174
>XP_005273160
          Length = 286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RARIAVC 8
           R R+AVC
Sbjct: 234 RLRLAVC 240
>NP_057259
          Length = 343

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2  RARIAVCC 9
          R+R+  CC
Sbjct: 6  RSRVLRCC 13
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.354    0.146    0.560 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 438,685
Number of extensions: 470
Number of successful extensions: 103
Number of sequences better than 10000.0: 103
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 103
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (17.1 bits)
S2: 28 (15.4 bits)

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