Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 NP_001005855 17 4312 NP_006238 16 7355 NP_733468 16 7355 NP_653091 16 7355 NP_001191213 16 7355 NP_078963 16 7355 NP_001078934 16 7355 NP_001193816 16 7355 NP_001322 16 7355 NP_060857 16 7355 NP_001164608 16 7355 NP_001186131 16 7355 NP_001186130 16 7355 NP_001167531 16 7355 NP_060254 16 7355 XP_005252140 16 7355 XP_005247836 16 7355 XP_006713811 16 7355 XP_006713810 16 7355 XP_005247834 16 7355 XP_005264902 16 7355 XP_005264901 16 7355 XP_005264900 16 7355 NP_001439 15 9605 NP_001058 15 9605 NP_001189489 15 9605 NP_059998 15 9605 NP_997351 15 9605 NP_001003698 15 9605 NP_001161816 15 9605 NP_001003699 15 9605 NP_005094 15 9605 XP_005257689 15 9605 XP_005254268 15 9605 XP_005271792 15 9605 XP_005271791 15 9605 XP_006715911 15 9605 XP_006715910 15 9605 XP_006715224 15 9605 XP_005249329 15 9605 XP_006715223 15 9605 XP_006715222 15 9605 XP_005249333 15 9605 XP_006715221 15 9605 XP_006715220 15 9605 XP_005249332 15 9605 XP_006715219 15 9605 NP_689705 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2921 LLANEKSDN 2929>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2937 LLANEKSDN 2945>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L ANEKSDN Sbjct: 2938 LLANEKSDN 2946>NP_001005855 Length = 387 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 LR+NEKS + Sbjct: 373 LRSNEKSSS 381>NP_006238 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 LR N ++DN Sbjct: 300 LRGNHETDN 308>NP_733468 Length = 2342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 ANE++DN Sbjct: 8 ANEENDN 14>NP_653091 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 ANE++DN Sbjct: 8 ANEENDN 14>NP_001191213 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 LR N ++DN Sbjct: 278 LRGNHETDN 286>NP_078963 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 513 LESNQKSDD 521>NP_001078934 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 N+KSDN Sbjct: 769 NQKSDN 774>NP_001193816 Length = 887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 N+KSDN Sbjct: 816 NQKSDN 821>NP_001322 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 N+KSDN Sbjct: 870 NQKSDN 875>NP_060857 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 + ++EKSDN Sbjct: 464 MSSDEKSDN 472>NP_001164608 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 + ++EKSDN Sbjct: 450 MSSDEKSDN 458>NP_001186131 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 484 LESNQKSDD 492>NP_001186130 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 513 LESNQKSDD 521>NP_001167531 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 L +EKSDN Sbjct: 310 LSEDEKSDN 318>NP_060254 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 L +EKSDN Sbjct: 374 LSEDEKSDN 382>XP_005252140 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 + ++EKSDN Sbjct: 464 MSSDEKSDN 472>XP_005247836 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 301 LESNQKSDD 309>XP_006713811 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 513 LESNQKSDD 521>XP_006713810 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 512 LESNQKSDD 520>XP_005247834 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRANEKSDN 9 L +N+KSD+ Sbjct: 513 LESNQKSDD 521>XP_005264902 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 L +EKSDN Sbjct: 38 LSEDEKSDN 46>XP_005264901 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 L +EKSDN Sbjct: 310 LSEDEKSDN 318>XP_005264900 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRANEKSDN 9 L +EKSDN Sbjct: 374 LSEDEKSDN 382>NP_001439 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 ANEK+D+ Sbjct: 523 ANEKADS 529>NP_001058 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 NE+SDN Sbjct: 1103 NEESDN 1108>NP_001189489 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 AN+KS+N Sbjct: 131 ANKKSEN 137>NP_059998 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 AN+KS+N Sbjct: 131 ANKKSEN 137>NP_997351 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 N+KSDN Sbjct: 112 NKKSDN 117>NP_001003698 Length = 1687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1484 RSSEKSDD 1491>NP_001161816 Length = 1687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1484 RSSEKSDD 1491>NP_001003699 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>NP_005094 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 NEKS+N Sbjct: 147 NEKSEN 152>XP_005257689 Length = 1519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 NE+SDN Sbjct: 1091 NEESDN 1096>XP_005254268 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 RAN+KS++ Sbjct: 29 RANKKSES 36>XP_005271792 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 NEKS+N Sbjct: 147 NEKSEN 152>XP_005271791 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEKSDN 9 NEKS+N Sbjct: 147 NEKSEN 152>XP_006715911 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 AN+KS+N Sbjct: 100 ANKKSEN 106>XP_006715910 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ANEKSDN 9 AN+KS+N Sbjct: 154 ANKKSEN 160>XP_006715224 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_005249329 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_006715223 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_006715222 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_005249333 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_006715221 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_006715220 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_005249332 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>XP_006715219 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RANEKSDN 9 R++EKSD+ Sbjct: 1539 RSSEKSDD 1546>NP_689705 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ANEKSDN 9 ANE SDN Sbjct: 603 ANEISDN 609Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.113 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,672 Number of extensions: 695 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |