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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_008835                                                              19     869
NP_001075109                                                           19     869
NP_689824                                                              16    7355
XP_005255358                                                           16    7355
XP_005255356                                                           16    7355
XP_005255355                                                           16    7355
NP_001138483                                                           16    7355
NP_055833                                                              15    9605
NP_001186871                                                           15    9605
NP_055843                                                              15    9605
NP_085150                                                              15    9605
NP_001155038                                                           15    9605
NP_001155037                                                           15    9605
NP_001155036                                                           15    9605
NP_001155035                                                           15    9605
NP_001155034                                                           15    9605
NP_001155033                                                           15    9605
NP_001155032                                                           15    9605
XP_005257331                                                           15    9605
XP_006715462                                                           15    9605
XP_006715461                                                           15    9605
XP_006715460                                                           15    9605
XP_006715459                                                           15    9605
XP_006715458                                                           15    9605
XP_006715457                                                           15    9605
XP_006715456                                                           15    9605

>NP_008835
          Length = 4128

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LRAIFTSEI 9
            LR IFTSEI
Sbjct: 2939 LRGIFTSEI 2947



>NP_001075109
          Length = 4097

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LRAIFTSEI 9
            LR IFTSEI
Sbjct: 2939 LRGIFTSEI 2947



>NP_689824
          Length = 740

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  LRAIFTSEI 9
          LRA+ TSE+
Sbjct: 87 LRALSTSEL 95



>XP_005255358
          Length = 1086

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSEI
Sbjct: 227 AMFTSEI 233



>XP_005255356
          Length = 1114

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSEI
Sbjct: 200 AMFTSEI 206



>XP_005255355
          Length = 1121

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSEI
Sbjct: 227 AMFTSEI 233



>NP_001138483
          Length = 1141

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSEI
Sbjct: 227 AMFTSEI 233



>NP_055833
          Length = 2465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2184 AIFSSEI 2190



>NP_001186871
          Length = 2476

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2175 AIFSSEI 2181



>NP_055843
          Length = 1360

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            A+FTSE+
Sbjct: 1000 ALFTSEL 1006



>NP_085150
          Length = 941

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   LRAIFTSE 8
           L++IFT+E
Sbjct: 672 LKSIFTTE 679



>NP_001155038
          Length = 1268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 908 ALFTSEL 914



>NP_001155037
          Length = 1276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 916 ALFTSEL 922



>NP_001155036
          Length = 1297

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 937 ALFTSEL 943



>NP_001155035
          Length = 1305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 945 ALFTSEL 951



>NP_001155034
          Length = 1323

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 963 ALFTSEL 969



>NP_001155033
          Length = 1331

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 971 ALFTSEL 977



>NP_001155032
          Length = 1352

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   AIFTSEI 9
           A+FTSE+
Sbjct: 992 ALFTSEL 998



>XP_005257331
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRAIFTS 7
          +RA+FTS
Sbjct: 10 IRALFTS 16



>XP_006715462
          Length = 2452

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2151 AIFSSEI 2157



>XP_006715461
          Length = 2456

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2175 AIFSSEI 2181



>XP_006715460
          Length = 2465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2184 AIFSSEI 2190



>XP_006715459
          Length = 2475

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2174 AIFSSEI 2180



>XP_006715458
          Length = 2476

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2175 AIFSSEI 2181



>XP_006715457
          Length = 2485

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2184 AIFSSEI 2190



>XP_006715456
          Length = 2485

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    AIFTSEI 9
            AIF+SEI
Sbjct: 2184 AIFSSEI 2190



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.335    0.144    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 310,609
Number of extensions: 380
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.3 bits)
S2: 28 (15.4 bits)