Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1482 NP_001075109 18 1482 NP_001171886 17 2528 NP_115513 17 2528 NP_001171887 17 2528 XP_006713407 17 2528 XP_006713406 17 2528 XP_006713405 17 2528 XP_006713404 17 2528 NP_003679 17 3301 NP_001119526 17 3301 NP_001119527 17 3301 XP_006724629 17 3301 XP_006724628 17 3301 XP_005272743 17 3301 NP_001121797 16 5631 NP_036577 16 5631 NP_079032 16 5631 NP_001185950 16 5631 XP_006721915 16 5631 XP_005270210 16 5631 XP_006718033 16 5631 NP_055418 16 5631 NP_001129111 16 7355 NP_001288 16 7355 NP_004466 16 7355 NP_001273059 16 7355 NP_055898 16 7355 NP_057591 16 7355 NP_671725 16 7355 NP_757379 16 7355 NP_001240841 16 7355 NP_055988 16 7355 NP_055833 16 7355 NP_001186871 16 7355 NP_699197 16 7355 XP_005257515 16 7355 XP_005257513 16 7355 XP_005258010 16 7355 XP_005258009 16 7355 XP_005258007 16 7355 XP_006721197 16 7355 XP_006715463 16 7355 XP_006715462 16 7355 XP_006715461 16 7355 XP_006715460 16 7355 XP_006715459 16 7355 XP_006715458 16 7355 XP_006715457 16 7355 XP_006715456 16 7355 XP_005262708 16 7355 XP_005262706 16 7355 XP_006714063 16 7355 XP_005262705 16 7355 XP_006714062 16 7355 XP_005262704 16 7355 XP_005262703 16 7355 XP_006710418 16 7355 NP_000287 15 9605 NP_001009944 15 9605 XP_006720958 15 9605 XP_006720957 15 9605 XP_005255427 15 9605 XP_006720956 15 9605 XP_006720955 15 9605 XP_006720954 15 9605 XP_006720953 15 9605 XP_006720952 15 9605>NP_008835 Length = 4128 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 LQSV ALTE Sbjct: 3129 LQSVQALTE 3137>NP_001075109 Length = 4097 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 LQSV ALTE Sbjct: 3129 LQSVQALTE 3137>NP_001171886 Length = 782 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 18 QSIHLLTE 25>NP_115513 Length = 904 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 140 QSIHLLTE 147>NP_001171887 Length = 782 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 18 QSIHLLTE 25>XP_006713407 Length = 648 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 140 QSIHLLTE 147>XP_006713406 Length = 669 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 140 QSIHLLTE 147>XP_006713405 Length = 947 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 140 QSIHLLTE 147>XP_006713404 Length = 947 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+H LTE Sbjct: 140 QSIHLLTE 147>NP_003679 Length = 921 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 354 LEEIHALTD 362>NP_001119526 Length = 898 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 354 LEEIHALTD 362>NP_001119527 Length = 897 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 348 LEEIHALTD 356>XP_006724629 Length = 885 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 348 LEEIHALTD 356>XP_006724628 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 348 LEEIHALTD 356>XP_005272743 Length = 920 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQSVHALTE 9 L+ +HALT+ Sbjct: 348 LEEIHALTD 356>NP_001121797 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LQSVHAL 7 LQSVHA+ Sbjct: 117 LQSVHAV 123>NP_036577 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LQSVHAL 7 LQSVHA+ Sbjct: 117 LQSVHAV 123>NP_079032 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSVHALTE 9 QS+H+LT+ Sbjct: 250 QSLHSLTQ 257>NP_001185950 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LQSVHAL 7 LQSVHA+ Sbjct: 117 LQSVHAV 123>XP_006721915 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSVHALTE 9 Q +H LTE Sbjct: 110 QKIHGLTE 117>XP_005270210 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSVHALTE 9 QS+H+LT+ Sbjct: 189 QSLHSLTQ 196>XP_006718033 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSVHALTE 9 QS+H+LT+ Sbjct: 189 QSLHSLTQ 196>NP_055418 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSVHALTE 9 Q +H LTE Sbjct: 110 QKIHGLTE 117>NP_001129111 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_001288 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_004466 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 405 SVHALT 410>NP_001273059 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_055898 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+ ALTE Sbjct: 1155 QSISALTE 1162>NP_057591 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+ ALTE Sbjct: 1155 QSISALTE 1162>NP_671725 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 40 SVHALT 45>NP_757379 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 40 SVHALT 45>NP_001240841 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>NP_055988 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>NP_055833 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2034 SVHALT 2039>NP_001186871 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2025 SVHALT 2030>NP_699197 Length = 3571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L S+HALT Sbjct: 1445 LPSLHALT 1452>XP_005257515 Length = 1256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+ ALTE Sbjct: 1155 QSISALTE 1162>XP_005257513 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 QS+ ALTE Sbjct: 1154 QSISALTE 1161>XP_005258010 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 328 SVHALT 333>XP_005258009 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 356 SVHALT 361>XP_005258007 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 405 SVHALT 410>XP_006721197 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSVHALTE 9 Q VH++TE Sbjct: 116 QPVHSITE 123>XP_006715463 Length = 2434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715462 Length = 2452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2001 SVHALT 2006>XP_006715461 Length = 2456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2025 SVHALT 2030>XP_006715460 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715459 Length = 2475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2024 SVHALT 2029>XP_006715458 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2025 SVHALT 2030>XP_006715457 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715456 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 2034 SVHALT 2039>XP_005262708 Length = 1039 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 263 LQSLHKLCE 271>XP_005262706 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 263 LQSLHKLCE 271>XP_006714063 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>XP_005262705 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>XP_006714062 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>XP_005262704 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>XP_005262703 Length = 1275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQSVHALTE 9 LQS+H L E Sbjct: 392 LQSLHKLCE 400>XP_006710418 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVHALT 8 SVHALT Sbjct: 40 SVHALT 45>NP_000287 Length = 4302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2481 LGAVHALT 2488>NP_001009944 Length = 4303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2481 LGAVHALT 2488>XP_006720958 Length = 2675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2518 LGAVHALT 2525>XP_006720957 Length = 2688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2518 LGAVHALT 2525>XP_005255427 Length = 3288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 1466 LGAVHALT 1473>XP_006720956 Length = 3895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2073 LGAVHALT 2080>XP_006720955 Length = 4279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2457 LGAVHALT 2464>XP_006720954 Length = 4334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2518 LGAVHALT 2525>XP_006720953 Length = 4339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2518 LGAVHALT 2525>XP_006720952 Length = 4340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQSVHALT 8 L +VHALT Sbjct: 2518 LGAVHALT 2525Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.119 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 482,243 Number of extensions: 584 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |