Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001275701                                                           21     229
NP_004561                                                              21     229
NP_001275703                                                           21     229
XP_005253450                                                           21     229
XP_006719151                                                           21     229
NP_056541                                                              18    1935
NP_001130005                                                           18    1935
NP_775945                                                              17    2528
XP_006715526                                                           17    2528
XP_005266998                                                           17    2528
NP_001171658                                                           17    3301
NP_057021                                                              17    3301
NP_001171657                                                           17    3301
NP_110445                                                              17    3301
XP_006722977                                                           17    3301
XP_005260143                                                           17    3301
XP_005260145                                                           17    3301
XP_005260142                                                           17    3301
XP_005260144                                                           17    3301
NP_000353                                                              17    4312
XP_005268685                                                           17    4312
NP_000042                                                              16    5631
NP_003733                                                              16    5631
NP_997221                                                              16    5631
XP_006720493                                                           16    5631
XP_006718908                                                           16    5631
XP_005271621                                                           16    5631
XP_006718907                                                           16    5631
XP_006718906                                                           16    5631
XP_005271619                                                           16    5631
XP_005271618                                                           16    5631
XP_006712881                                                           16    5631
XP_006712880                                                           16    5631
NP_001139317                                                           16    7355
NP_598334                                                              16    7355
NP_002932                                                              16    7355
NP_001364                                                              16    7355
NP_056166                                                              16    7355
XP_006713341                                                           16    7355
XP_006713340                                                           16    7355
XP_006713339                                                           16    7355
XP_006711798                                                           16    7355
NP_001138867                                                           15    9605
NP_001138865                                                           15    9605
NP_006761                                                              15    9605
NP_079541                                                              15    9605
NP_001138866                                                           15    9605
NP_001138864                                                           15    9605
NP_001094343                                                           15    9605
NP_689550                                                              15    9605
NP_001129120                                                           15    9605
NP_056002                                                              15    9605
NP_001264154                                                           15    9605
NP_002835                                                              15    9605
NP_116098                                                              15    9605
NP_066024                                                              15    9605
XP_006725089                                                           15    9605
XP_006725088                                                           15    9605
XP_006725087                                                           15    9605
XP_006725086                                                           15    9605
XP_006725085                                                           15    9605
XP_006725084                                                           15    9605
XP_006725083                                                           15    9605
XP_006725082                                                           15    9605
XP_005255849                                                           15    9605
XP_005255848                                                           15    9605
XP_006718108                                                           15    9605
XP_006715604                                                           15    9605
XP_006715603                                                           15    9605
XP_005267143                                                           15    9605
XP_006715602                                                           15    9605
XP_006715601                                                           15    9605
XP_005267142                                                           15    9605
XP_006715600                                                           15    9605
XP_005267139                                                           15    9605
XP_006715599                                                           15    9605
XP_006715598                                                           15    9605
XP_006714020                                                           15    9605
XP_005248200                                                           15    9605
XP_005265555                                                           15    9605
XP_005265554                                                           15    9605
XP_005265552                                                           15    9605
NP_443073                                                              15    9605
>NP_001275701
          Length = 1486

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG NFY
Sbjct: 460 LQRKGENFY 468
>NP_004561
          Length = 1445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG NFY
Sbjct: 460 LQRKGENFY 468
>NP_001275703
          Length = 1264

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG NFY
Sbjct: 238 LQRKGENFY 246
>XP_005253450
          Length = 1486

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG NFY
Sbjct: 460 LQRKGENFY 468
>XP_006719151
          Length = 1486

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG NFY
Sbjct: 460 LQRKGENFY 468
>NP_056541
          Length = 597

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KGVNFY 9
           KGVNFY
Sbjct: 438 KGVNFY 443
>NP_001130005
          Length = 631

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KGVNFY 9
           KGVNFY
Sbjct: 473 KGVNFY 478
>NP_775945
          Length = 539

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG++ Y
Sbjct: 220 LQRKGISRY 228
>XP_006715526
          Length = 543

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG++ Y
Sbjct: 267 LQRKGISRY 275
>XP_005266998
          Length = 762

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           LQRKG++ Y
Sbjct: 267 LQRKGISRY 275
>NP_001171658
          Length = 511

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  LQRKGVNFY 9
          LQR+GV+ Y
Sbjct: 58 LQREGVSHY 66
>NP_057021
          Length = 578

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  LQRKGVNFY 9
          LQR+GV+ Y
Sbjct: 58 LQREGVSHY 66
>NP_001171657
          Length = 522

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  LQRKGVNFY 9
          LQR+GV+ Y
Sbjct: 58 LQREGVSHY 66
>NP_110445
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>XP_006722977
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>XP_005260143
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>XP_005260145
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>XP_005260142
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>XP_005260144
          Length = 396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  QRKGVNFY 9
          +RKGVN Y
Sbjct: 3  ERKGVNKY 10
>NP_000353
          Length = 211

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   QRKGVNF 8
           QRKG+N+
Sbjct: 131 QRKGLNY 137
>XP_005268685
          Length = 463

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           L ++GV+FY
Sbjct: 163 LSKEGVSFY 171
>NP_000042
          Length = 3056

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2641 QRKGIN 2646
>NP_003733
          Length = 1321

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LQRKGVNF 8
           L+RKGV F
Sbjct: 644 LERKGVYF 651
>NP_997221
          Length = 567

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           + +KG+ FY
Sbjct: 127 VNKKGIEFY 135
>XP_006720493
          Length = 567

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           + +KG+ FY
Sbjct: 127 VNKKGIEFY 135
>XP_006718908
          Length = 1708

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 1293 QRKGIN 1298
>XP_005271621
          Length = 2708

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2293 QRKGIN 2298
>XP_006718907
          Length = 3050

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2635 QRKGIN 2640
>XP_006718906
          Length = 3056

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2641 QRKGIN 2646
>XP_005271619
          Length = 3056

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2641 QRKGIN 2646
>XP_005271618
          Length = 3056

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QRKGVN 7
            QRKG+N
Sbjct: 2641 QRKGIN 2646
>XP_006712881
          Length = 1335

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LQRKGVNF 8
           L+RKGV F
Sbjct: 658 LERKGVYF 665
>XP_006712880
          Length = 1335

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LQRKGVNF 8
           L+RKGV F
Sbjct: 658 LERKGVYF 665
>NP_001139317
          Length = 1551

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 706 RKGVNY 711
>NP_598334
          Length = 1606

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 706 RKGVNY 711
>NP_002932
          Length = 1651

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 742 RKGVNY 747
>NP_001364
          Length = 4515

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LQRKGVNF 8
            LQR G NF
Sbjct: 2290 LQRSGGNF 2297

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    LQRKGVN 7
            LQR GVN
Sbjct: 3806 LQRTGVN 3812
>NP_056166
          Length = 222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L R GV FY
Sbjct: 167 LYRSGVAFY 175
>XP_006713341
          Length = 1600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 691 RKGVNY 696
>XP_006713340
          Length = 1615

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 706 RKGVNY 711
>XP_006713339
          Length = 1616

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RKGVNF 8
           RKGVN+
Sbjct: 707 RKGVNY 712
>XP_006711798
          Length = 4586

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LQRKGVNF 8
            LQR G NF
Sbjct: 2296 LQRSGGNF 2303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    LQRKGVN 7
            LQR GVN
Sbjct: 3868 LQRTGVN 3874
>NP_001138867
          Length = 402

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 342 LYRKGPPFY 350
>NP_001138865
          Length = 439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 342 LYRKGPPFY 350
>NP_006761
          Length = 520

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  QRKGVNF 8
          +R GVNF
Sbjct: 38 RRNGVNF 44
>NP_079541
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 368 LYRKGPPFY 376
>NP_001138866
          Length = 406

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 309 LYRKGPPFY 317
>NP_001138864
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 368 LYRKGPPFY 376
>NP_001094343
          Length = 388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           LQ++GV  Y
Sbjct: 327 LQKRGVQSY 335
>NP_689550
          Length = 395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           LQ++GV  Y
Sbjct: 327 LQKRGVQSY 335
>NP_001129120
          Length = 1446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>NP_056002
          Length = 1132

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   RKGVNFY 9
           RKG+N Y
Sbjct: 879 RKGLNAY 885
>NP_001264154
          Length = 470

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/9 (33%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           + +KG+++Y
Sbjct: 93  INQKGIDYY 101
>NP_002835
          Length = 1440

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>NP_116098
          Length = 581

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  LQRKGVN 7
          LQR GVN
Sbjct: 53 LQRLGVN 59
>NP_066024
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/9 (33%), Positives = 8/9 (88%)

Query: 1   LQRKGVNFY 9
           + +KG+++Y
Sbjct: 92  INQKGIDYY 100
>XP_006725089
          Length = 845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006725088
          Length = 866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006725087
          Length = 869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006725086
          Length = 1057

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 315 RKGYNIY 321
>XP_006725085
          Length = 1375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 633 RKGYNIY 639
>XP_006725084
          Length = 1375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 633 RKGYNIY 639
>XP_006725083
          Length = 1439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006725082
          Length = 1445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_005255849
          Length = 388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           LQ++GV  Y
Sbjct: 327 LQKRGVQSY 335
>XP_005255848
          Length = 395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LQRKGVNFY 9
           LQ++GV  Y
Sbjct: 327 LQKRGVQSY 335
>XP_006718108
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  LQRKGVN 7
          LQR GVN
Sbjct: 53 LQRLGVN 59
>XP_006715604
          Length = 869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715603
          Length = 869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_005267143
          Length = 890

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715602
          Length = 893

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715601
          Length = 1081

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 315 RKGYNIY 321
>XP_005267142
          Length = 1439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715600
          Length = 1445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_005267139
          Length = 1464

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715599
          Length = 1469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006715598
          Length = 1470

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   RKGVNFY 9
           RKG N Y
Sbjct: 704 RKGYNIY 710
>XP_006714020
          Length = 1097

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   RKGVNFY 9
           RKG+N Y
Sbjct: 844 RKGLNAY 850
>XP_005248200
          Length = 1103

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   RKGVNFY 9
           RKG+N Y
Sbjct: 879 RKGLNAY 885
>XP_005265555
          Length = 422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 325 LYRKGPPFY 333
>XP_005265554
          Length = 439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 342 LYRKGPPFY 350
>XP_005265552
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LQRKGVNFY 9
           L RKG  FY
Sbjct: 368 LYRKGPPFY 376
>NP_443073
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   QRKGVNF 8
           Q+KGV+F
Sbjct: 222 QQKGVSF 228
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.331    0.149    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 552,385
Number of extensions: 1061
Number of successful extensions: 85
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package