Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_004524 18 1935 XP_006720661 18 1935 XP_006720660 18 1935 NP_003259 17 2528 XP_006711570 17 2528 XP_006711569 17 2528 XP_006711568 17 2528 XP_005273300 17 2528 XP_006711567 17 2528 XP_006711566 17 2528 XP_005273298 17 2528 XP_005273299 17 2528 NP_001935 17 3301 NP_919299 17 4312 NP_002542 17 4312 XP_006719831 17 4312 NP_775791 17 4312 NP_689716 16 5631 NP_003406 16 7355 NP_694558 16 7355 NP_001274270 16 7355 NP_001159354 16 7355 NP_001159353 16 7355 NP_001078880 16 7355 NP_001274269 16 7355 NP_659502 16 7355 NP_001230064 16 7355 NP_065831 16 7355 NP_056343 16 7355 NP_001230065 16 7355 XP_005256660 16 7355 XP_005256659 16 7355 XP_005256658 16 7355 XP_005256656 16 7355 XP_006721565 16 7355 XP_006721564 16 7355 XP_006721563 16 7355 XP_005256655 16 7355 XP_005256654 16 7355 XP_006721562 16 7355 XP_006718547 16 7355 XP_005248298 16 7355 NP_001138424 16 7355 NP_006502 16 7355 NP_001091980 16 7355 NP_001181927 15 9605 NP_055800 15 9605 NP_057260 15 9605 NP_057631 15 9605 NP_001172003 15 9605 NP_001171988 15 9605 NP_078893 15 9605 NP_569057 15 9605 XP_006722421 15 9605 XP_006720500 15 9605 XP_005252265 15 9605 XP_005252264 15 9605 XP_006717348 15 9605 XP_006717347 15 9605 XP_006717346 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQQVFL ER Sbjct: 3030 LQQVFLEER 3038>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQQVFL ER Sbjct: 3022 LQQVFLEER 3030>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQQVFL ER Sbjct: 2983 LQQVFLEER 2991>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQQVFL ER Sbjct: 3062 LQQVFLEER 3070>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQQVFL ER Sbjct: 3075 LQQVFLEER 3083>NP_004524 Length = 1141 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QQVFLGER 9 QQVF+G+R Sbjct: 355 QQVFVGDR 362>XP_006720661 Length = 585 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 +QQ+FLGE Sbjct: 510 MQQLFLGE 517>XP_006720660 Length = 594 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 +QQ+FLGE Sbjct: 510 MQQLFLGE 517>NP_003259 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_006711570 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_006711569 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_006711568 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_005273300 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_006711567 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_006711566 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_005273298 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>XP_005273299 Length = 858 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQQVFLGE 8 L+Q+FLGE Sbjct: 475 LEQLFLGE 482>NP_001935 Length = 999 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QQVFLGE 8 QQ+F+GE Sbjct: 159 QQIFMGE 165>NP_919299 Length = 498 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQVFLGER 9 + VFLGER Sbjct: 370 EPVFLGER 377>NP_002542 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 L Q+FLG R Sbjct: 310 LWQIFLGRR 318>XP_006719831 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQVFLGER 9 + VFLGER Sbjct: 351 EPVFLGER 358>NP_775791 Length = 152 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 L+Q FLG R Sbjct: 45 LRQAFLGSR 53>NP_689716 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 L +VFLG R Sbjct: 610 LYEVFLGNR 618>NP_003406 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QQVFLGER 9 QQ+++GE+ Sbjct: 267 QQMYMGEK 274>NP_694558 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQQVFLGE 8 L +VF+GE Sbjct: 112 LNEVFIGE 119>NP_001274270 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQQVFLGE 8 L +VF+GE Sbjct: 112 LNEVFIGE 119>NP_001159354 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QQVFLGER 9 QQ+++GE+ Sbjct: 184 QQMYMGEK 191>NP_001159353 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QQVFLGER 9 QQ+++GE+ Sbjct: 267 QQMYMGEK 274>NP_001078880 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQQVFLGE 8 L +VF+GE Sbjct: 275 LNEVFIGE 282>NP_001274269 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQQVFLGE 8 L +VF+GE Sbjct: 112 LNEVFIGE 119>NP_659502 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFLGER 9 +FLGER Sbjct: 214 IFLGER 219>NP_001230064 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFLGER 9 +FLGER Sbjct: 151 IFLGER 156>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 LQQ+ LG R Sbjct: 156 LQQLHLGNR 164>NP_056343 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>NP_001230065 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFLGER 9 +FLGER Sbjct: 107 IFLGER 112>XP_005256660 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 100 IPSVFIGER 108>XP_005256659 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 100 IPSVFIGER 108>XP_005256658 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 100 IPSVFIGER 108>XP_005256656 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_006721565 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_006721564 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_006721563 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_005256655 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_005256654 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_006721562 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQQVFLGER 9 + VF+GER Sbjct: 135 IPSVFIGER 143>XP_006718547 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFLGER 9 +FLGER Sbjct: 190 IFLGER 195>XP_005248298 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQQVFLGE 8 L +VF+GE Sbjct: 275 LNEVFIGE 282>NP_001138424 Length = 2172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QQVFLGE 8 Q+VF+GE Sbjct: 1614 QEVFVGE 1620>NP_006502 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVFLGER 9 Q+FLGE+ Sbjct: 144 QMFLGEK 150>NP_001091980 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFLGER 9 +FLGER Sbjct: 190 IFLGER 195>NP_001181927 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LQQVFLG 7 LQQ FLG Sbjct: 221 LQQQFLG 227>NP_055800 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LQQVFLG 7 LQQ FLG Sbjct: 221 LQQQFLG 227>NP_057260 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QQVFLGE 8 Q+VFLG+ Sbjct: 79 QEVFLGK 85>NP_057631 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QQVFLGE 8 Q+VFLG+ Sbjct: 79 QEVFLGK 85>NP_001172003 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 956 LQEIYKGEK 964>NP_001171988 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>NP_078893 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>NP_569057 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQQVFL 6 LQQVFL Sbjct: 244 LQQVFL 249>XP_006722421 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQQVFL 6 LQQVFL Sbjct: 244 LQQVFL 249>XP_006720500 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LQQVFLG 7 LQQ FLG Sbjct: 221 LQQQFLG 227>XP_005252265 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>XP_005252264 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>XP_006717348 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>XP_006717347 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200>XP_006717346 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQQVFLGER 9 LQ+++ GE+ Sbjct: 1192 LQEIYKGEK 1200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.150 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 539,873 Number of extensions: 1085 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |