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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_444256                                                              17    2528
NP_444254                                                              17    2528
NP_444253                                                              17    2528
NP_444255                                                              17    2528
XP_005247551                                                           17    2528
XP_005247550                                                           17    2528
XP_006713712                                                           17    2528
XP_005247549                                                           17    2528
XP_006719430                                                           16    7355
XP_006719429                                                           16    7355
XP_006719428                                                           16    7355
XP_005253933                                                           16    7355
NP_001084                                                              16    7355
NP_001275925                                                           15    9605
NP_001108479                                                           15    9605
NP_001108480                                                           15    9605
NP_001275926                                                           15    9605
NP_919258                                                              15    9605
NP_001106905                                                           15    9605
XP_005256678                                                           15    9605
XP_006721577                                                           15    9605
XP_005262809                                                           15    9605
XP_006714144                                                           15    9605
XP_005262807                                                           15    9605
XP_005262806                                                           15    9605

>NP_444256
          Length = 1794

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 201 LQPSARVSV 209



>NP_444254
          Length = 1845

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 201 LQPSARVSV 209



>NP_444253
          Length = 1914

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 201 LQPSARVSV 209



>NP_444255
          Length = 1863

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 201 LQPSARVSV 209



>XP_005247551
          Length = 1855

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 211 LQPSARVSV 219



>XP_005247550
          Length = 1856

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 211 LQPSARVSV 219



>XP_006713712
          Length = 1923

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 211 LQPSARVSV 219



>XP_005247549
          Length = 1924

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQ SARVSV
Sbjct: 211 LQPSARVSV 219



>XP_006719430
          Length = 2256

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LQQSARVSV 9
           LQQ  R+SV
Sbjct: 214 LQQGKRISV 222



>XP_006719429
          Length = 2395

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LQQSARVSV 9
           LQQ  R+SV
Sbjct: 416 LQQGKRISV 424



>XP_006719428
          Length = 2458

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LQQSARVSV 9
           LQQ  R+SV
Sbjct: 416 LQQGKRISV 424



>XP_005253933
          Length = 2458

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LQQSARVSV 9
           LQQ  R+SV
Sbjct: 416 LQQGKRISV 424



>NP_001084
          Length = 2458

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LQQSARVSV 9
           LQQ  R+SV
Sbjct: 416 LQQGKRISV 424



>NP_001275925
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 392 LQQSSYVSI 400



>NP_001108479
          Length = 528

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 260 LQQSSYVSI 268



>NP_001108480
          Length = 528

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 260 LQQSSYVSI 268



>NP_001275926
          Length = 528

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 260 LQQSSYVSI 268



>NP_919258
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 481 LQQSSYVSI 489



>NP_001106905
          Length = 221

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QQSARVSV 9
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



>XP_005256678
          Length = 203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QQSARVSV 9
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



>XP_006721577
          Length = 203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QQSARVSV 9
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



>XP_005262809
          Length = 546

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 278 LQQSSYVSI 286



>XP_006714144
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 481 LQQSSYVSI 489



>XP_005262807
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 481 LQQSSYVSI 489



>XP_005262806
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LQQSARVSV 9
           LQQS+ VS+
Sbjct: 499 LQQSSYVSI 507



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.313    0.115    0.251 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 220,878
Number of extensions: 230
Number of successful extensions: 25
Number of sequences better than 10000.0: 25
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 25
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)