Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_000375 16 5631 NP_001175 16 5631 NP_079173 16 5631 NP_001259041 16 5631 NP_001259040 16 5631 NP_001259039 16 5631 NP_001259038 16 5631 NP_001259035 16 5631 NP_001259042 16 5631 XP_005245551 16 5631 XP_006711616 16 5631 XP_006711615 16 5631 XP_006711612 16 5631 XP_006711611 16 5631 XP_005245548 16 5631 XP_006711610 16 5631 XP_006711609 16 5631 XP_006711608 16 5631 XP_006711607 16 5631 XP_006711606 16 5631 XP_006711605 16 5631 NP_001274732 16 7355 NP_115703 16 7355 NP_932160 16 7355 NP_001274733 16 7355 NP_932161 16 7355 NP_932163 16 7355 NP_057736 16 7355 XP_006718089 16 7355 XP_006718088 16 7355 XP_006718087 16 7355 XP_006718086 16 7355 XP_006718085 16 7355 XP_006718084 16 7355 NP_001182036 15 9605 NP_112218 15 9605 NP_001182035 15 9605 NP_001017388 15 9605 NP_001182037 15 9605 XP_006714095 15 9605 XP_006714094 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQLRTYSIV 9 LQLRTYS+V Sbjct: 3786 LQLRTYSVV 3794>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQLRTYSIV 9 LQLRTYS+V Sbjct: 3786 LQLRTYSVV 3794>NP_000375 Length = 4563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL+ YS+V Sbjct: 1786 LQLQPYSLV 1794>NP_001175 Length = 2644 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 L +RTY+++ Sbjct: 2360 LHIRTYAVI 2368>NP_079173 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 223 LQLGTYSLL 231>NP_001259041 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>NP_001259040 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>NP_001259039 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>NP_001259038 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>NP_001259035 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 155 LQLGTYSLL 163>NP_001259042 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>XP_005245551 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 83 LQLGTYSLL 91>XP_006711616 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 218 LQLGTYSLL 226>XP_006711615 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 218 LQLGTYSLL 226>XP_006711612 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 246 LQLGTYSLL 254>XP_006711611 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 305 LQLGTYSLL 313>XP_005245548 Length = 454 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 326 LQLGTYSLL 334>XP_006711610 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 329 LQLGTYSLL 337>XP_006711609 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 329 LQLGTYSLL 337>XP_006711608 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 354 LQLGTYSLL 362>XP_006711607 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 357 LQLGTYSLL 365>XP_006711606 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 378 LQLGTYSLL 386>XP_006711605 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQLRTYSIV 9 LQL TYS++ Sbjct: 423 LQLGTYSLL 431>NP_001274732 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_115703 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932160 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_001274733 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932161 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932163 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_057736 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQLRTYSI 8 L+LR+YS+ Sbjct: 26 LELRSYSL 33>XP_006718089 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718088 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718087 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718086 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718085 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718084 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQLRTYSI 8 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_001182036 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 534 IQLETYSEV 542>NP_112218 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 534 IQLETYSEV 542>NP_001182035 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 534 IQLETYSEV 542>NP_001017388 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 534 IQLETYSEV 542>NP_001182037 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 520 IQLETYSEV 528>XP_006714095 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 520 IQLETYSEV 528>XP_006714094 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQLRTYSIV 9 +QL TYS V Sbjct: 520 IQLETYSEV 528Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.142 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,804 Number of extensions: 582 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |