Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443099 16 5631 XP_006720008 16 5631 XP_006720006 16 5631 NP_005742 16 7355 NP_671714 16 7355 NP_004789 16 7355 NP_997698 16 7355 NP_004835 16 7355 NP_085148 16 7355 NP_001018009 16 7355 NP_001597 16 7355 NP_940931 16 7355 XP_006721943 16 7355 XP_006721942 16 7355 XP_006717059 16 7355 XP_006715890 16 7355 XP_005250160 16 7355 XP_005250159 16 7355 XP_006713483 16 7355 XP_006712581 16 7355 XP_005246132 16 7355 NP_001073973 16 7355 NP_004612 15 9605 NP_872603 15 9605 NP_056372 15 9605 NP_001273612 15 9605 NP_001432 15 9605 NP_079003 15 9605 NP_001264057 15 9605 NP_954863 15 9605 NP_065122 15 9605 NP_001161048 15 9605 NP_001264056 15 9605 XP_006718961 15 9605 XP_005272093 15 9605 XP_006714294 15 9605 NP_001161049 15 9605 NP_570141 15 9605 NP_001135440 15 9605 NP_057312 15 9605 NP_001273611 15 9605>NP_443099 Length = 1738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQKMM+ +V Sbjct: 377 LQKMMRSSV 385>XP_006720008 Length = 1645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQKMM+ +V Sbjct: 377 LQKMMRSSV 385>XP_006720006 Length = 1713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQKMM+ +V Sbjct: 377 LQKMMRSSV 385>NP_005742 Length = 3907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQKMMKRA 8 LQK +KRA Sbjct: 3662 LQKSLKRA 3669>NP_671714 Length = 3899 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQKMMKRA 8 LQK +KRA Sbjct: 3654 LQKSLKRA 3661>NP_004789 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 Q+MMKR V Sbjct: 623 QQMMKRPV 630>NP_997698 Length = 2466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 +Q MM+RA+ Sbjct: 693 IQDMMERAI 701>NP_004835 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K +KRA+ Sbjct: 197 LEKKLKRAI 205>NP_085148 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQK ++RA+ Sbjct: 211 LQKTLRRAI 219>NP_001018009 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K +KRA+ Sbjct: 40 LEKKLKRAI 48>NP_001597 Length = 2436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 +Q MM+RA+ Sbjct: 663 IQDMMERAI 671>NP_940931 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQKMMK 6 LQKMMK Sbjct: 1284 LQKMMK 1289>XP_006721943 Length = 1456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQKMMK 6 LQKMMK Sbjct: 1284 LQKMMK 1289>XP_006721942 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQKMMK 6 LQKMMK Sbjct: 1284 LQKMMK 1289>XP_006717059 Length = 2435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 +Q MM+RA+ Sbjct: 662 IQDMMERAI 670>XP_006715890 Length = 3860 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQKMMKRA 8 LQK +KRA Sbjct: 3615 LQKSLKRA 3622>XP_005250160 Length = 3939 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQKMMKRA 8 LQK +KRA Sbjct: 3694 LQKSLKRA 3701>XP_005250159 Length = 3952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQKMMKRA 8 LQK +KRA Sbjct: 3707 LQKSLKRA 3714>XP_006713483 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K +KRA+ Sbjct: 40 LEKKLKRAI 48>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 QK+M+RA+ Sbjct: 598 QKIMQRAI 605>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 QK+M+RA+ Sbjct: 598 QKIMQRAI 605>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 QK+M+RA+ Sbjct: 598 QKIMQRAI 605>NP_004612 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 856 QKIMKRLI 863>NP_872603 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 ++MMKRA+ Sbjct: 65 EEMMKRAL 72>NP_056372 Length = 1954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LQKMMKR 7 LQKM+K+ Sbjct: 1029 LQKMLKK 1035>NP_001273612 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 ++MMKRA+ Sbjct: 65 EEMMKRAL 72>NP_001432 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQK MK++V Sbjct: 535 LQKGMKKSV 543>NP_079003 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQK+ K+AV Sbjct: 79 LQKLGKKAV 87>NP_001264057 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQK+ K+AV Sbjct: 79 LQKLGKKAV 87>NP_954863 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K+M+R V Sbjct: 197 LEKLMRRLV 205>NP_065122 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 781 QKIMKRLI 788>NP_001161048 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 665 QKIMKRLI 672>NP_001264056 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 LQK+ K+AV Sbjct: 79 LQKLGKKAV 87>XP_006718961 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 831 QKIMKRLI 838>XP_005272093 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 396 QKIMKRLI 403>XP_006714294 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 ++MMKRA+ Sbjct: 104 EEMMKRAL 111>NP_001161049 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKMMKRAV 9 QK+MKR + Sbjct: 720 QKIMKRLI 727>NP_570141 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K+M+R V Sbjct: 120 LEKLMRRLV 128>NP_001135440 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQKMMKRAV 9 L+K+M+R V Sbjct: 86 LEKLMRRLV 94>NP_057312 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 ++MMKRA+ Sbjct: 65 EEMMKRAL 72>NP_001273611 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKMMKRAV 9 ++MMKRA+ Sbjct: 69 EEMMKRAL 76Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.130 0.312 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 323,706 Number of extensions: 504 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |