Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 NP_001888 18 1935 NP_005236 17 2528 XP_006714202 17 2528 XP_005262892 17 2528 XP_005262891 17 2528 NP_899645 17 4312 NP_899647 17 4312 NP_899648 17 4312 NP_004281 17 4312 NP_001188294 17 4312 NP_899646 17 4312 XP_006726766 17 4312 XP_006726765 17 4312 XP_006726759 17 4312 XP_006726758 17 4312 XP_006725646 17 4312 XP_006725645 17 4312 XP_006725644 17 4312 XP_005266696 17 4312 XP_006721475 17 4312 XP_006721469 17 4312 XP_005266687 17 4312 XP_005266686 17 4312 XP_005266679 17 4312 XP_005268598 17 4312 XP_005268597 17 4312 XP_005268596 17 4312 XP_005268595 17 4312 XP_005268594 17 4312 XP_005268593 17 4312 NP_060098 16 5631 NP_001120680 16 5631 NP_001096078 16 5631 NP_115665 16 5631 XP_006720760 16 5631 XP_006714864 16 5631 XP_006714306 16 5631 XP_006714305 16 5631 XP_005263139 16 5631 XP_005247178 16 5631 NP_001167558 16 7355 NP_858045 16 7355 NP_006525 16 7355 NP_001167559 16 7355 NP_003591 16 7355 NP_940838 16 7355 NP_940837 16 7355 NP_940839 16 7355 NP_940835 16 7355 NP_940836 16 7355 NP_001026903 16 7355 XP_006723935 16 7355 XP_005260591 16 7355 XP_006723934 16 7355 NP_001073291 15 9605 NP_000417 15 9605 NP_001012779 15 9605 NP_001265380 15 9605 NP_001265382 15 9605 NP_009168 15 9605 NP_510880 15 9605 NP_976063 15 9605 XP_005267039 15 9605 XP_005267038 15 9605 XP_005272023 15 9605 XP_006712289 15 9605 XP_005246314 15 9605 XP_005246313 15 9605 XP_005246312 15 9605 XP_005246311 15 9605 XP_006712288 15 9605 XP_006712287 15 9605 XP_005246309 15 9605 XP_006712286 15 9605 XP_006710077 15 9605 XP_006710069 15 9605 XP_006710066 15 9605 XP_006710065 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 LQIN+GQSQ Sbjct: 219 LQINNGQSQ 227>NP_001888 Length = 2322 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ++DGQ Q Sbjct: 1105 LQVSDGQHQ 1113>NP_005236 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LQINDGQ 7 +Q+NDGQ Sbjct: 3904 IQVNDGQ 3910>XP_006714202 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LQINDGQ 7 +Q+NDGQ Sbjct: 3904 IQVNDGQ 3910>XP_005262892 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LQINDGQ 7 +Q+NDGQ Sbjct: 3904 IQVNDGQ 3910>XP_005262891 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LQINDGQ 7 +Q+NDGQ Sbjct: 3904 IQVNDGQ 3910>NP_899645 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 127 IQIRDGQVQ 135>NP_899647 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>NP_899648 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>NP_004281 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>NP_001188294 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>NP_899646 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>XP_006726766 Length = 609 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 536 LQVNGGEAQ 544>XP_006726765 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 546 LQVNGGEAQ 554>XP_006726759 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 556 LQVNGGEAQ 564>XP_006726758 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 556 LQVNGGEAQ 564>XP_006725646 Length = 1112 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 261 LQVNGGEAQ 269>XP_006725645 Length = 1122 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 271 LQVNGGEAQ 279>XP_006725644 Length = 1255 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 404 LQVNGGEAQ 412>XP_005266696 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 464 LQVNGGEAQ 472>XP_006721475 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 556 LQVNGGEAQ 564>XP_006721469 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 566 LQVNGGEAQ 574>XP_005266687 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 566 LQVNGGEAQ 574>XP_005266686 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 566 LQVNGGEAQ 574>XP_005266679 Length = 690 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 LQ+N G++Q Sbjct: 617 LQVNGGEAQ 625>XP_005268598 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 127 IQIRDGQVQ 135>XP_005268597 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 127 IQIRDGQVQ 135>XP_005268596 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 127 IQIRDGQVQ 135>XP_005268595 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>XP_005268594 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>XP_005268593 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 +QI DGQ Q Sbjct: 253 IQIRDGQVQ 261>NP_060098 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 +++N GQSQ Sbjct: 636 VEMNQGQSQ 644>NP_001120680 Length = 2002 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 +++N GQSQ Sbjct: 636 VEMNQGQSQ 644>NP_001096078 Length = 2263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L + DGQSQ Sbjct: 1107 LVLTDGQSQ 1115>NP_115665 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 Q+NDGQ Sbjct: 440 QLNDGQ 445>XP_006720760 Length = 998 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LQINDG 6 LQ+NDG Sbjct: 63 LQVNDG 68>XP_006714864 Length = 772 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 Q+NDGQ Sbjct: 441 QLNDGQ 446>XP_006714306 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 +++N GQSQ Sbjct: 636 VEMNQGQSQ 644>XP_006714305 Length = 1902 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 +++N GQSQ Sbjct: 636 VEMNQGQSQ 644>XP_005263139 Length = 2002 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQINDGQSQ 9 +++N GQSQ Sbjct: 636 VEMNQGQSQ 644>XP_005247178 Length = 2263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L + DGQSQ Sbjct: 1107 LVLTDGQSQ 1115>NP_001167558 Length = 1423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INDGQS 8 +NDGQS Sbjct: 307 LNDGQS 312>NP_858045 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INDGQS 8 +NDGQS Sbjct: 307 LNDGQS 312>NP_006525 Length = 1420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INDGQS 8 +NDGQS Sbjct: 307 LNDGQS 312>NP_001167559 Length = 1415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INDGQS 8 +NDGQS Sbjct: 307 LNDGQS 312>NP_003591 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_940838 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_940837 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_940839 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_940835 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_940836 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>NP_001026903 Length = 149 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QINDGQSQ 9 QINDG + Sbjct: 52 QINDGNGE 59>XP_006723935 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>XP_005260591 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 37 LPVNSGQAQ 45>XP_006723934 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 L +N GQ+Q Sbjct: 53 LPVNSGQAQ 61>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 +INDGQ Sbjct: 2837 KINDGQ 2842>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 +INDGQ Sbjct: 2841 KINDGQ 2846>NP_001012779 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QINDGQSQ 9 +I+DGQ Q Sbjct: 362 RIDDGQGQ 369>NP_001265380 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>NP_001265382 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 225 IQIDEGESE 233>NP_009168 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>NP_510880 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QINDGQSQ 9 QIND Q+Q Sbjct: 1775 QINDLQAQ 1782>NP_976063 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QINDGQSQ 9 QIND Q+Q Sbjct: 1775 QINDLQAQ 1782>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 +INDGQ Sbjct: 2925 KINDGQ 2930>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QINDGQ 7 +INDGQ Sbjct: 2929 KINDGQ 2934>XP_005272023 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QINDGQSQ 9 +I+DGQ Q Sbjct: 361 RIDDGQGQ 368>XP_006712289 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_005246314 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_005246313 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_005246312 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_005246311 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_006712288 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_006712287 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 208 IQIDEGESE 216>XP_005246309 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 225 IQIDEGESE 233>XP_006712286 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LQINDGQSQ 9 +QI++G+S+ Sbjct: 228 IQIDEGESE 236>XP_006710077 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 LQ+N G +Q Sbjct: 254 LQVNGGAAQ 262>XP_006710069 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 LQ+N G +Q Sbjct: 254 LQVNGGAAQ 262>XP_006710066 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 LQ+N G +Q Sbjct: 254 LQVNGGAAQ 262>XP_006710065 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQINDGQSQ 9 LQ+N G +Q Sbjct: 254 LQVNGGAAQ 262Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.125 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 620,636 Number of extensions: 3424 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |