Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_001242 17 3301 NP_001035148 17 3301 NP_037506 17 4312 NP_001155901 17 4312 NP_663735 17 4312 NP_113611 17 4312 NP_001034965 16 5631 NP_001166217 16 5631 NP_001166216 16 5631 NP_443160 16 5631 NP_006355 16 5631 NP_001003802 16 5631 NP_001003801 16 5631 NP_003069 16 5631 NP_116780 16 5631 XP_005258661 16 5631 XP_005258658 16 5631 XP_005258657 16 5631 XP_005258656 16 5631 XP_005258655 16 5631 XP_005258654 16 5631 XP_006721500 16 5631 XP_005267319 16 5631 XP_006715356 16 5631 XP_006715355 16 5631 NP_006354 16 5631 NP_116781 16 5631 NP_057726 16 7355 NP_694945 16 7355 NP_115515 16 7355 NP_003557 16 7355 XP_005259367 16 7355 XP_006723476 16 7355 XP_006723475 16 7355 XP_005254495 16 7355 XP_006719694 16 7355 NP_001360 15 9605 NP_115560 15 9605 NP_001254711 15 9605 NP_001254712 15 9605 NP_060219 15 9605 NP_079225 15 9605 NP_001002034 15 9605 XP_005261430 15 9605 XP_005259087 15 9605 XP_006723320 15 9605 XP_005259086 15 9605 XP_006723319 15 9605 XP_005259085 15 9605 XP_006718323 15 9605 XP_005253071 15 9605 XP_005253069 15 9605 XP_005253068 15 9605 XP_006718322 15 9605 XP_005253066 15 9605 XP_005248319 15 9605 XP_005248296 15 9605 XP_005248295 15 9605 XP_006714376 15 9605 XP_006714375 15 9605 XP_005271313 15 9605 NP_009208 15 9605 NP_060498 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQDLQQSLV 9 L+DLQQSLV Sbjct: 702 LKDLQQSLV 710>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQDLQQSLV 9 L+DLQQSLV Sbjct: 702 LKDLQQSLV 710>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQDLQQSLV 9 L+DLQQSLV Sbjct: 702 LKDLQQSLV 710>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQDLQQSLV 9 L+DLQQSLV Sbjct: 702 LKDLQQSLV 710>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LQDLQQSLV 9 L+DLQQSLV Sbjct: 702 LKDLQQSLV 710>NP_001242 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 +QDLQQ +V Sbjct: 228 MQDLQQKVV 236>NP_001035148 Length = 327 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 +QDLQQ +V Sbjct: 201 MQDLQQKVV 209>NP_037506 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+DLQQS+ Sbjct: 706 LKDLQQSI 713>NP_001155901 Length = 873 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+DLQQS+ Sbjct: 711 LKDLQQSI 718>NP_663735 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 +Q+LQQSL Sbjct: 187 IQELQQSL 194>NP_113611 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 +Q+LQQSL Sbjct: 187 IQELQQSL 194>NP_001034965 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>NP_001166217 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 594 QDLTQSLI 601>NP_001166216 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 612 QDLTQSLI 619>NP_443160 Length = 804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDLQQ + Sbjct: 654 LQDLQQQV 661>NP_006355 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 610 QDLTQSLI 617>NP_001003802 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QDLQQSLV 9 Q+L+QSLV Sbjct: 459 QELEQSLV 466>NP_001003801 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QDLQQSLV 9 Q+L+QSLV Sbjct: 472 QELEQSLV 479>NP_003069 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QDLQQSLV 9 Q+L+QSLV Sbjct: 459 QELEQSLV 466>NP_116780 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 612 QDLTQSLI 619>XP_005258661 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>XP_005258658 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>XP_005258657 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 40 LQDLEQGL 47>XP_005258656 Length = 356 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>XP_005258655 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>XP_005258654 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 120 LQDLEQGL 127>XP_006721500 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDLQQ + Sbjct: 550 LQDLQQQV 557>XP_005267319 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 634 QDLTQSLI 641>XP_006715356 Length = 112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDLQQSL 8 QDL+QSL Sbjct: 36 QDLEQSL 42>XP_006715355 Length = 127 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDLQQSL 8 QDL+QSL Sbjct: 51 QDLEQSL 57>NP_006354 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 612 QDLTQSLI 619>NP_116781 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QDLQQSLV 9 QDL QSL+ Sbjct: 612 QDLTQSLI 619>NP_057726 Length = 3674 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQDLQQSLV 9 L LQQSLV Sbjct: 617 LAQLQQSLV 625>NP_694945 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQDL+Q L Sbjct: 435 LQDLEQRL 442>NP_115515 Length = 1050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 246 LQDLQQ 251>NP_003557 Length = 1411 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 750 LQDLQQ 755>XP_005259367 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 50 LQDLQQ 55>XP_006723476 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 246 LQDLQQ 251>XP_006723475 Length = 1050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 246 LQDLQQ 251>XP_005254495 Length = 3694 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQDLQQSLV 9 L LQQSLV Sbjct: 637 LAQLQQSLV 645>XP_006719694 Length = 1465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQDLQQ 6 LQDLQQ Sbjct: 804 LQDLQQ 809>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+D+QQ+L Sbjct: 1027 LEDVQQTL 1034>NP_115560 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+DLQ+S+ Sbjct: 1167 LKDLQESI 1174>NP_001254711 Length = 1301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 423 LQELDQSL 430>NP_001254712 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 423 LQELDQSL 430>NP_060219 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 423 LQELDQSL 430>NP_079225 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QDLQQSL 8 QDL QSL Sbjct: 240 QDLMQSL 246>NP_001002034 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQD +QSL Sbjct: 135 LQDARQSL 142>XP_005261430 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQD +QSL Sbjct: 135 LQDARQSL 142>XP_005259087 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388>XP_006723320 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388>XP_005259086 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388>XP_006723319 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388>XP_005259085 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388>XP_006718323 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 423 LQELDQSL 430>XP_005253071 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 423 LQELDQSL 430>XP_005253069 Length = 1238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 513 LQELDQSL 520>XP_005253068 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 513 LQELDQSL 520>XP_006718322 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 513 LQELDQSL 520>XP_005253066 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQDLQQSL 8 LQ+L QSL Sbjct: 513 LQELDQSL 520>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+D+QQ+L Sbjct: 1012 LEDVQQTL 1019>XP_005248296 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 ++D+QQSL Sbjct: 72 VKDIQQSL 79>XP_005248295 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 ++D+QQSL Sbjct: 72 VKDIQQSL 79>XP_006714376 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QDLQQSL 8 QDL QSL Sbjct: 240 QDLMQSL 246>XP_006714375 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QDLQQSL 8 QDL QSL Sbjct: 240 QDLMQSL 246>XP_005271313 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 L+DLQ+S+ Sbjct: 909 LKDLQESI 916>NP_009208 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LQDLQQSL 8 ++D+QQSL Sbjct: 72 VKDIQQSL 79>NP_060498 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQDLQQSLV 9 LQ+LQQ ++ Sbjct: 380 LQELQQIII 388Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.132 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,749 Number of extensions: 961 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |