Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_056293 18 1935 NP_115479 18 1935 XP_005256357 17 2528 XP_005256356 17 2528 XP_005256355 17 2528 XP_005256354 17 2528 NP_055787 17 2528 XP_005266741 17 4312 XP_005266739 17 4312 NP_114097 17 4312 NP_001007103 16 5631 NP_115814 16 5631 NP_036466 16 5631 NP_775735 16 5631 NP_004923 16 5631 XP_006722429 16 5631 XP_006722428 16 5631 XP_006722427 16 5631 XP_006722426 16 5631 XP_005258225 16 5631 XP_006722425 16 5631 XP_005258223 16 5631 XP_005267218 16 5631 XP_006715641 16 5631 XP_006715640 16 5631 XP_006715639 16 5631 XP_006714538 16 5631 NP_002903 16 7355 NP_001273361 16 7355 NP_001273360 16 7355 NP_067636 16 7355 NP_001265484 16 7355 NP_001265483 16 7355 NP_872619 16 7355 NP_006348 16 7355 XP_006715607 16 7355 XP_006715606 16 7355 XP_005246301 16 7355 NP_115646 15 9605 NP_002325 15 9605 NP_001001974 15 9605 NP_067635 15 9605 NP_062540 15 9605 NP_001182537 15 9605 NP_001120717 15 9605 NP_001120716 15 9605 NP_006835 15 9605 NP_006718 15 9605 XP_006724135 15 9605 XP_005259774 15 9605 XP_006718294 15 9605 XP_005252980 15 9605 XP_005270078 15 9605 XP_006717998 15 9605 XP_005270077 15 9605 XP_005270076 15 9605 XP_005270075 15 9605 XP_005270074 15 9605 XP_005270073 15 9605 XP_005252152 15 9605 XP_005252153 15 9605 XP_006717249 15 9605 XP_006711023 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 LQAV QRDP Sbjct: 2794 LQAVAQRDP 2802>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 LQAV QRDP Sbjct: 2794 LQAVAQRDP 2802>NP_056293 Length = 772 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LQAVDQRDP 9 L+AVD+R+P Sbjct: 455 LEAVDRRNP 463>NP_115479 Length = 840 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LQAVDQRDP 9 L+AVD+R+P Sbjct: 523 LEAVDRRNP 531>XP_005256357 Length = 481 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 LQAVD DP Sbjct: 292 LQAVDAGDP 300>XP_005256356 Length = 701 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 LQAVD DP Sbjct: 512 LQAVDAGDP 520>XP_005256355 Length = 708 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 LQAVD DP Sbjct: 527 LQAVDAGDP 535>XP_005256354 Length = 716 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 LQAVD DP Sbjct: 527 LQAVDAGDP 535>NP_055787 Length = 676 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 LQAVD DP Sbjct: 527 LQAVDAGDP 535>XP_005266741 Length = 649 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 + AVDQ DP Sbjct: 515 VSAVDQDDP 523>XP_005266739 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 + AVDQ DP Sbjct: 515 VSAVDQDDP 523>NP_114097 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 + AVDQ DP Sbjct: 515 VSAVDQDDP 523>NP_001007103 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 456 LEVVDKRNP 464>NP_115814 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 481 LEVVDKRNP 489>NP_036466 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QAVDQRD 8 QAVD RD Sbjct: 393 QAVDSRD 399>NP_775735 Length = 623 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>NP_004923 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 L AVD+ DP Sbjct: 509 LHAVDKDDP 517>XP_006722429 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_006722428 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_006722427 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_006722426 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 215 LEVVDKRNP 223>XP_005258225 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_006722425 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_005258223 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 302 LEVVDKRNP 310>XP_005267218 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 481 LEVVDKRNP 489>XP_006715641 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 481 LEVVDKRNP 489>XP_006715640 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 481 LEVVDKRNP 489>XP_006715639 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LQAVDQRDP 9 L+ VD+R+P Sbjct: 516 LEVVDKRNP 524>XP_006714538 Length = 2035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QAVDQRD 8 QAVD RD Sbjct: 393 QAVDSRD 399>NP_002903 Length = 3130 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 + +DQ+DP Sbjct: 2841 ETLDQKDP 2848>NP_001273361 Length = 3052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 + +DQ+DP Sbjct: 2763 ETLDQKDP 2770>NP_001273360 Length = 3052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 + +DQ+DP Sbjct: 2763 ETLDQKDP 2770>NP_067636 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 93 LQANDQKD 100>NP_001265484 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DQRDP 9 DQRDP Sbjct: 23 DQRDP 27>NP_001265483 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DQRDP 9 DQRDP Sbjct: 23 DQRDP 27>NP_872619 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DQRDP 9 DQRDP Sbjct: 23 DQRDP 27>NP_006348 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DQRDP 9 DQRDP Sbjct: 23 DQRDP 27>XP_006715607 Length = 3052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 + +DQ+DP Sbjct: 2763 ETLDQKDP 2770>XP_006715606 Length = 3130 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 + +DQ+DP Sbjct: 2841 ETLDQKDP 2848>XP_005246301 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DQRDP 9 DQRDP Sbjct: 23 DQRDP 27>NP_115646 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 374 LHMIDQYDP 382>NP_002325 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 +QAVD+ P Sbjct: 1299 MQAVDRAQP 1307>NP_001001974 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_067635 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_062540 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>NP_001182537 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_001120717 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>NP_001120716 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>NP_006835 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQAVDQ 6 LQAVDQ Sbjct: 160 LQAVDQ 165>NP_006718 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 + AVD+ DP Sbjct: 510 ISAVDKDDP 518>XP_006724135 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QAVDQRDP 9 +A+DQR P Sbjct: 145 RALDQRGP 152>XP_005259774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LQAVDQ 6 LQAVDQ Sbjct: 160 LQAVDQ 165>XP_006718294 Length = 1808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 +QAVD+ P Sbjct: 1299 MQAVDRAQP 1307>XP_005252980 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LQAVDQRDP 9 +QAVD+ P Sbjct: 1299 MQAVDRAQP 1307>XP_005270078 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_006717998 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270077 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270076 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270075 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270074 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270073 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LQAVDQRD 8 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005252152 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>XP_005252153 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>XP_006717249 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 376 LHLIDQYDP 384>XP_006711023 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LQAVDQRDP 9 L +DQ DP Sbjct: 379 LHMIDQYDP 387Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.134 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,307 Number of extensions: 889 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |