Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 19 665 XP_006713721 19 665 NP_006210 19 869 NP_001242974 19 869 XP_005247589 19 869 XP_006713722 19 869 XP_005247588 19 869 XP_005247587 19 869 NP_000565 16 5631 NP_001108224 16 5631 XP_005273134 16 5631 NP_114115 16 5631 NP_005624 16 7355 NP_001152869 16 7355 NP_001152870 16 7355 NP_443170 16 7355 NP_940912 16 7355 XP_005264572 16 7355 XP_005244926 16 7355 XP_005244924 16 7355 XP_005244923 16 7355 XP_005245939 16 7355 NP_109590 15 9605 NP_008821 15 9605 NP_001278414 15 9605 NP_001274182 15 9605 NP_001274181 15 9605 NP_001034869 15 9605 NP_612449 15 9605 NP_003135 15 9605 NP_002738 15 9605 NP_002548 15 9605 XP_005258487 15 9605 XP_005258356 15 9605 XP_005254596 15 9605 XP_005254595 15 9605 XP_005254594 15 9605 XP_005254593 15 9605 XP_006712096 15 9605 XP_006712095 15 9605 XP_005264430 15 9605 XP_006712094 15 9605 XP_006712093 15 9605 XP_005264429 15 9605 XP_006710047 15 9605 NP_002739 15 9605 NP_001457 15 9605 NP_001004469 15 9605 NP_060022 15 9605 NP_001229267 15 9605>NP_006209 Length = 1068 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLSVK Sbjct: 565 LPKLLLSVK 573>XP_006713721 Length = 1068 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLSVK Sbjct: 565 LPKLLLSVK 573>NP_006210 Length = 1070 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 573 LPKLLLSIK 581>NP_001242974 Length = 582 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 85 LPKLLLSIK 93>XP_005247589 Length = 1053 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 556 LPKLLLSIK 564>XP_006713722 Length = 1070 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 573 LPKLLLSIK 581>XP_005247588 Length = 1070 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 573 LPKLLLSIK 581>XP_005247587 Length = 1070 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LPRLLLSVK 9 LP+LLLS+K Sbjct: 573 LPKLLLSIK 581>NP_000565 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL V Sbjct: 18 LPRLLLLV 25>NP_001108224 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL V Sbjct: 18 LPRLLLLV 25>XP_005273134 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL V Sbjct: 18 LPRLLLLV 25>NP_114115 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LPRLLLSVK 9 LPR LSVK Sbjct: 238 LPRKTLSVK 246>NP_005624 Length = 1333 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LPRLLLS 7 LPRLLL+ Sbjct: 339 LPRLLLA 345>NP_001152869 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>NP_001152870 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>NP_443170 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>NP_940912 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PRLLLSVK 9 P++LLS+K Sbjct: 850 PKILLSLK 857>XP_005264572 Length = 1318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LPRLLLS 7 LPRLLL+ Sbjct: 339 LPRLLLA 345>XP_005244926 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>XP_005244924 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>XP_005244923 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LPRLLLSV 8 LPRLLL + Sbjct: 2 LPRLLLLI 9>XP_005245939 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LPRLLLS 7 LPRLLL+ Sbjct: 333 LPRLLLN 339>NP_109590 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 595 PRLLLS 600>NP_008821 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 190 PRLLLS 195>NP_001278414 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 190 PRLLLS 195>NP_001274182 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLLLSVK 9 RLL+SVK Sbjct: 181 RLLISVK 187>NP_001274181 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLLLSVK 9 RLL+SVK Sbjct: 180 RLLISVK 186>NP_001034869 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLLLSVK 9 RLL+SVK Sbjct: 180 RLLISVK 186>NP_612449 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LPRLLL 6 LPRLLL Sbjct: 168 LPRLLL 173>NP_003135 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LPRLLL 6 LPRLLL Sbjct: 4 LPRLLL 9>NP_002738 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 197 PRLLLS 202>NP_002548 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 177 PRLLLS 182>XP_005258487 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 169 PRLLLS 174>XP_005258356 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 197 PRLLLS 202>XP_005254596 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 200 PRLLLS 205>XP_005254595 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 200 PRLLLS 205>XP_005254594 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 200 PRLLLS 205>XP_005254593 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 200 PRLLLS 205>XP_006712096 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 111 PRLLLS 116>XP_006712095 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 781 PRLLLS 786>XP_005264430 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 353 PRLLLS 358>XP_006712094 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 781 PRLLLS 786>XP_006712093 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 781 PRLLLS 786>XP_005264429 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 781 PRLLLS 786>XP_006710047 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 195 PRLLLS 200>NP_002739 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 200 PRLLLS 205>NP_001457 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LPRLLL 6 LPRLLL Sbjct: 7 LPRLLL 12>NP_001004469 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LPRLLLSV 8 +PR+LLS+ Sbjct: 78 VPRMLLSL 85>NP_060022 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 767 PRLLLS 772>NP_001229267 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PRLLLS 7 PRLLLS Sbjct: 767 PRLLLS 772Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.150 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,469 Number of extensions: 680 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |