Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 509 NP_000242 20 509 XP_005264389 20 509 NP_060918 17 2528 NP_001182121 17 3301 NP_689560 17 3301 NP_150241 17 4312 NP_001165604 16 5631 NP_001165603 16 5631 NP_002101 16 5631 NP_001165601 16 5631 NP_003990 16 5631 NP_004847 16 5631 NP_612565 16 5631 NP_001268230 16 5631 NP_001165602 16 5631 NP_001165600 16 5631 XP_006720844 16 5631 XP_005254856 16 5631 XP_006720842 16 5631 XP_005254855 16 5631 XP_005254854 16 5631 XP_006720841 16 5631 XP_005254853 16 5631 XP_006719294 16 5631 XP_006714572 16 5631 XP_005248442 16 5631 XP_005248441 16 5631 NP_001138947 16 5631 NP_001093869 16 7355 NP_665698 16 7355 NP_001098983 16 7355 NP_001093870 16 7355 NP_075055 16 7355 XP_006722904 16 7355 XP_005260077 16 7355 XP_005262709 16 7355 XP_006713075 16 7355 XP_005264984 16 7355 XP_005264983 16 7355 XP_005264982 16 7355 XP_005264981 16 7355 XP_005264980 16 7355 XP_006713074 16 7355 XP_005264979 16 7355 XP_005264978 16 7355 NP_001106849 15 9605 NP_060663 15 9605 NP_003907 15 9605 NP_001259000 15 9605 NP_057129 15 9605 NP_612504 15 9605 NP_065776 15 9605 NP_113628 15 9605 XP_005274671 15 9605 XP_005274669 15 9605 XP_006715966 15 9605 XP_005250277 15 9605 XP_006715965 15 9605 XP_005250276 15 9605 XP_006715964 15 9605 XP_006715963 15 9605>NP_001245210 Length = 868 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LPNVIKALE 9 LPNVI+ALE Sbjct: 348 LPNVIQALE 356>NP_000242 Length = 934 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LPNVIKALE 9 LPNVI+ALE Sbjct: 414 LPNVIQALE 422>XP_005264389 Length = 921 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LPNVIKALE 9 LPNVI+ALE Sbjct: 414 LPNVIQALE 422>NP_060918 Length = 1230 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LPNVIKAL 8 +PN++KAL Sbjct: 432 VPNIVKAL 439>NP_001182121 Length = 784 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP VIKA++ Sbjct: 433 LPGVIKAID 441>NP_689560 Length = 973 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP VIKA++ Sbjct: 529 LPGVIKAID 537>NP_150241 Length = 882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LPNVIKALE 9 LPN +ALE Sbjct: 684 LPNFFRALE 692>NP_001165604 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 443 PEVIRALE 450>NP_001165603 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 444 PEVIRALE 451>NP_002101 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 464 PEVIRALE 471>NP_001165601 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 463 PEVIRALE 470>NP_003990 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KALE Sbjct: 892 NVLKALE 898>NP_004847 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 494 LPRLIEALE 502>NP_612565 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 494 LPRLIEALE 502>NP_001268230 Length = 766 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 384 LPRLIEALE 392>NP_001165602 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 442 PEVIRALE 449>NP_001165600 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PNVIKALE 9 P VI+ALE Sbjct: 443 PEVIRALE 450>XP_006720844 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 20 LPRLIEALE 28>XP_005254856 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 508 LPRLIEALE 516>XP_006720842 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 494 LPRLIEALE 502>XP_005254855 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 508 LPRLIEALE 516>XP_005254854 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 508 LPRLIEALE 516>XP_006720841 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 508 LPRLIEALE 516>XP_005254853 Length = 974 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +I+ALE Sbjct: 508 LPRLIEALE 516>XP_006719294 Length = 2348 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP+ +KA+E Sbjct: 162 LPDTLKAIE 170>XP_006714572 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KALE Sbjct: 560 NVLKALE 566>XP_005248442 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KALE Sbjct: 893 NVLKALE 899>XP_005248441 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KALE Sbjct: 893 NVLKALE 899>NP_001138947 Length = 2351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP+ +KA+E Sbjct: 162 LPDTLKAIE 170>NP_001093869 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PNVIKAL 8 PN +KAL Sbjct: 496 PNAVKAL 502>NP_665698 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 282 NLIKALE 288>NP_001098983 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 233 NLIKALE 239>NP_001093870 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PNVIKAL 8 PN +KAL Sbjct: 496 PNAVKAL 502>NP_075055 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +++A+E Sbjct: 729 LPTILRAIE 737>XP_006722904 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +++A+E Sbjct: 264 LPTILRAIE 272>XP_005260077 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 LP +++A+E Sbjct: 723 LPTILRAIE 731>XP_005262709 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PNVIKAL 8 PN +KAL Sbjct: 496 PNAVKAL 502>XP_006713075 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_005264984 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 87 NLIKALE 93>XP_005264983 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_005264982 Length = 1286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 233 NLIKALE 239>XP_005264981 Length = 1290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_005264980 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_006713074 Length = 1318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_005264979 Length = 1322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>XP_005264978 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 N+IKALE Sbjct: 274 NLIKALE 280>NP_001106849 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 +PN+I A+E Sbjct: 1250 IPNLIFAIE 1258>NP_060663 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LPNVIKALE 9 +PN+I A+E Sbjct: 1190 IPNLIFAIE 1198>NP_003907 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KA+E Sbjct: 129 NVLKAIE 135>NP_001259000 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KA+E Sbjct: 129 NVLKAIE 135>NP_057129 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LPNVIKAL 8 LP+++K+L Sbjct: 61 LPSIVKSL 68>NP_612504 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 80 IPNLVKA 86>NP_065776 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>NP_113628 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LPNVIK 6 LPNV+K Sbjct: 34 LPNVLK 39>XP_005274671 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KA+E Sbjct: 171 NVLKAIE 177>XP_005274669 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVIKALE 9 NV+KA+E Sbjct: 171 NVLKAIE 177>XP_006715966 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>XP_005250277 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>XP_006715965 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>XP_005250276 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>XP_006715964 Length = 964 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210>XP_006715963 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LPNVIKA 7 +PN++KA Sbjct: 204 IPNLVKA 210Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.139 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 572,723 Number of extensions: 902 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |