Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004351                                                              19     665
NP_001784                                                              17    3301
NP_077741                                                              17    3301
NP_001932                                                              17    3301
NP_000012                                                              17    4312
NP_001229268                                                           17    4312
NP_002618                                                              17    4312
XP_005267921                                                           17    4312
XP_005252524                                                           17    4312
NP_115763                                                              16    5631
NP_001264044                                                           16    5631
NP_060267                                                              16    5631
NP_001363                                                              16    5631
NP_775899                                                              16    5631
XP_006725466                                                           16    5631
XP_006724384                                                           16    5631
XP_005259650                                                           16    5631
XP_006722085                                                           16    5631
XP_006722084                                                           16    5631
XP_005257655                                                           16    5631
XP_006722083                                                           16    5631
XP_005257654                                                           16    5631
XP_005257653                                                           16    5631
XP_005257652                                                           16    5631
XP_006721530                                                           16    5631
XP_006721529                                                           16    5631
XP_006721528                                                           16    5631
NP_085145                                                              16    5631
NP_001171718                                                           16    7355
NP_062565                                                              16    7355
NP_001171715                                                           16    7355
NP_001171714                                                           16    7355
NP_001171717                                                           16    7355
NP_001171722                                                           16    7355
NP_001171721                                                           16    7355
NP_001171723                                                           16    7355
NP_001171716                                                           16    7355
NP_001171719                                                           16    7355
NP_003728                                                              16    7355
NP_001438                                                              16    7355
XP_005253264                                                           16    7355
XP_006717541                                                           16    7355
XP_005252592                                                           16    7355
XP_005252591                                                           16    7355
XP_006717540                                                           16    7355
XP_006717539                                                           16    7355
XP_006717538                                                           16    7355
XP_006717537                                                           16    7355
XP_005252589                                                           16    7355
XP_006717536                                                           16    7355
XP_006717535                                                           16    7355
XP_006717534                                                           16    7355
XP_005252588                                                           16    7355
XP_005252585                                                           16    7355
XP_006717512                                                           16    7355
XP_005252522                                                           16    7355
XP_006714824                                                           16    7355
NP_689488                                                              16    7355
NP_000086                                                              15    9605
NP_064592                                                              15    9605
NP_665809                                                              15    9605
NP_114148                                                              15    9605
NP_001171809                                                           15    9605
NP_056327                                                              15    9605
NP_006188                                                              15    9605
NP_001098713                                                           15    9605
NP_065817                                                              15    9605
NP_653299                                                              15    9605
NP_001267728                                                           15    9605
NP_848599                                                              15    9605
NP_004696                                                              15    9605
NP_001361                                                              15    9605
NP_060009                                                              15    9605
NP_001239537                                                           15    9605
NP_009043                                                              15    9605
NP_002579                                                              15    9605
NP_115778                                                              15    9605
NP_001239536                                                           15    9605
XP_006721125                                                           15    9605
XP_005252384                                                           15    9605
XP_006716412                                                           15    9605
XP_005273578                                                           15    9605
XP_005273577                                                           15    9605
XP_005273576                                                           15    9605
XP_006716411                                                           15    9605
XP_006716410                                                           15    9605
XP_006716409                                                           15    9605
XP_005273569                                                           15    9605
XP_005273566                                                           15    9605
XP_006716408                                                           15    9605
XP_006716407                                                           15    9605
XP_006716406                                                           15    9605
XP_006716405                                                           15    9605
XP_006716404                                                           15    9605
XP_006716403                                                           15    9605
XP_006716402                                                           15    9605
XP_006716401                                                           15    9605
XP_006716400                                                           15    9605
XP_006716399                                                           15    9605
XP_006713163                                                           15    9605
XP_006713081                                                           15    9605
XP_006712019                                                           15    9605
XP_006711565                                                           15    9605
XP_006711563                                                           15    9605
XP_006711562                                                           15    9605
XP_006711561                                                           15    9605
NP_061720                                                              15    9605
>NP_004351
          Length = 882

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           L TVTDQND
Sbjct: 249 LITVTDQND 257

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TVTDQND 9
           TVTD ND
Sbjct: 364 TVTDTND 370
>NP_001784
          Length = 829

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           VTDQND
Sbjct: 205 VTDQND 210
>NP_077741
          Length = 839

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TVTDQND 9
           TVTD ND
Sbjct: 344 TVTDSND 350
>NP_001932
          Length = 896

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TVTDQND 9
           TVTD ND
Sbjct: 344 TVTDSND 350
>NP_000012
          Length = 467

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  NTVTDQND 9
          NTV  QND
Sbjct: 24 NTVRSQND 31
>NP_001229268
          Length = 776

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+TD  D
Sbjct: 548 LNTITDTCD 556
>NP_002618
          Length = 784

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+TD  D
Sbjct: 556 LNTITDTCD 564
>XP_005267921
          Length = 467

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  NTVTDQND 9
          NTV  QND
Sbjct: 24 NTVRSQND 31
>XP_005252524
          Length = 746

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+TD  D
Sbjct: 518 LNTITDTCD 526
>NP_115763
          Length = 1243

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 678 VTSVSDQND 686
>NP_001264044
          Length = 4516

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2270 LNTVMDDN 2277
>NP_060267
          Length = 525

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   NTVTDQND 9
           NTV  QND
Sbjct: 430 NTVLGQND 437
>NP_001363
          Length = 4486

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2238 LNTVMDDN 2245
>NP_775899
          Length = 4462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2215 LNTVMDDN 2222
>XP_006725466
          Length = 417

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+ DQ D
Sbjct: 104 LNTLADQVD 112
>XP_006724384
          Length = 417

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+ DQ D
Sbjct: 104 LNTLADQVD 112
>XP_005259650
          Length = 377

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   NTVTDQND 9
           NTV  QND
Sbjct: 282 NTVLGQND 289
>XP_006722085
          Length = 907

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 342 VTSVSDQND 350
>XP_006722084
          Length = 943

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 342 VTSVSDQND 350
>XP_005257655
          Length = 971

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 370 VTSVSDQND 378
>XP_006722083
          Length = 1233

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 678 VTSVSDQND 686
>XP_005257654
          Length = 1237

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 678 VTSVSDQND 686
>XP_005257653
          Length = 1242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 678 VTSVSDQND 686
>XP_005257652
          Length = 1279

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LNTVTDQND 9
           + +V+DQND
Sbjct: 678 VTSVSDQND 686
>XP_006721530
          Length = 2746

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2238 LNTVMDDN 2245
>XP_006721529
          Length = 2817

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2238 LNTVMDDN 2245
>XP_006721528
          Length = 3869

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            LNTV D N
Sbjct: 2238 LNTVMDDN 2245
>NP_085145
          Length = 433

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LNTVTDQND 9
           LNT+ DQ D
Sbjct: 120 LNTLADQVD 128
>NP_001171718
          Length = 1273

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 817 LNTVDDQ 823
>NP_062565
          Length = 1356

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 863 LNTVDDQ 869
>NP_001171715
          Length = 1340

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 847 LNTVDDQ 853
>NP_001171714
          Length = 1353

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>NP_001171717
          Length = 1310

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 817 LNTVDDQ 823
>NP_001171722
          Length = 1000

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 829 LNTVDDQ 835
>NP_001171721
          Length = 1031

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>NP_001171723
          Length = 988

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 817 LNTVDDQ 823
>NP_001171716
          Length = 1319

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 863 LNTVDDQ 869
>NP_001171719
          Length = 1266

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 773 LNTVDDQ 779
>NP_003728
          Length = 3298

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    VTDQND 9
            VTD+ND
Sbjct: 1536 VTDEND 1541
>NP_001438
          Length = 4349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3    TVTDQND 9
            ++TD+ND
Sbjct: 2895 SITDEND 2901
>XP_005253264
          Length = 3443

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    VTDQND 9
            VTD+ND
Sbjct: 1681 VTDEND 1686
>XP_006717541
          Length = 1295

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 802 LNTVDDQ 808
>XP_005252592
          Length = 1017

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 846 LNTVDDQ 852
>XP_005252591
          Length = 1030

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 859 LNTVDDQ 865
>XP_006717540
          Length = 1141

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>XP_006717539
          Length = 1170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>XP_006717538
          Length = 1235

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>XP_006717537
          Length = 1296

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 803 LNTVDDQ 809
>XP_005252589
          Length = 1309

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 816 LNTVDDQ 822
>XP_006717536
          Length = 1314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 821 LNTVDDQ 827
>XP_006717535
          Length = 1316

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 860 LNTVDDQ 866
>XP_006717534
          Length = 1321

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 828 LNTVDDQ 834
>XP_005252588
          Length = 1323

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 830 LNTVDDQ 836
>XP_005252585
          Length = 1352

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LNTVTDQ 7
           LNTV DQ
Sbjct: 859 LNTVDDQ 865
>XP_006717512
          Length = 797

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LNTVTD 6
           LNT+TD
Sbjct: 518 LNTITD 523
>XP_005252522
          Length = 835

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LNTVTD 6
           LNT+TD
Sbjct: 556 LNTITD 561
>XP_006714824
          Length = 4349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3    TVTDQND 9
            ++TD+ND
Sbjct: 2895 SITDEND 2901
>NP_689488
          Length = 665

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   NTVTDQN 8
           NTVTD++
Sbjct: 644 NTVTDES 650
>NP_000086
          Length = 757

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 588 VNTVTDDD 595
>NP_064592
          Length = 1561

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    NTVTDQND 9
            NT+ DQ D
Sbjct: 1409 NTMKDQQD 1416
>NP_665809
          Length = 371

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NTVTDQN 8
           N+VTD N
Sbjct: 97  NSVTDSN 103
>NP_114148
          Length = 450

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NTVTDQN 8
           N+VTD N
Sbjct: 176 NSVTDSN 182
>NP_001171809
          Length = 1148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           +TD+ND
Sbjct: 443 ITDEND 448
>NP_056327
          Length = 4265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1959 MNTVLDDN 1966
>NP_006188
          Length = 2024

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1630 TLTQQND 1636
>NP_001098713
          Length = 1101

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           +TD+ND
Sbjct: 443 ITDEND 448
>NP_065817
          Length = 1100

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           +TD+ND
Sbjct: 443 ITDEND 448
>NP_653299
          Length = 1001

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           VTD+ND
Sbjct: 181 VTDKND 186
>NP_001267728
          Length = 911

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  VTDQND 9
          VTD+ND
Sbjct: 91 VTDKND 96
>NP_848599
          Length = 3092

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1628 MNTVLDDN 1635
>NP_004696
          Length = 761

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   NTVTDQ 7
           NT+TDQ
Sbjct: 710 NTLTDQ 715
>NP_001361
          Length = 4158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1849 MNTVLDDN 1856
>NP_060009
          Length = 4116

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1804 MNTVLDDN 1811
>NP_001239537
          Length = 836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 663 VNTVTDDD 670
>NP_009043
          Length = 956

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 783 VNTVTDDD 790
>NP_002579
          Length = 934

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           VTD+ND
Sbjct: 557 VTDRND 562
>NP_115778
          Length = 863

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   VTDQND 9
           VTD+ND
Sbjct: 557 VTDRND 562
>NP_001239536
          Length = 947

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 774 VNTVTDDD 781
>XP_006721125
          Length = 4070

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1758 MNTVLDDN 1765
>XP_005252384
          Length = 841

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   NTVTDQND 9
           NT+ DQ D
Sbjct: 689 NTMKDQQD 696
>XP_006716412
          Length = 1970

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1576 TLTQQND 1582
>XP_005273578
          Length = 2016

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1622 TLTQQND 1628
>XP_005273577
          Length = 2048

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1654 TLTQQND 1660
>XP_005273576
          Length = 2048

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1654 TLTQQND 1660
>XP_006716411
          Length = 2064

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1670 TLTQQND 1676
>XP_006716410
          Length = 2072

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1678 TLTQQND 1684
>XP_006716409
          Length = 2076

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1682 TLTQQND 1688
>XP_005273569
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1692 TLTQQND 1698
>XP_005273566
          Length = 2087

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1693 TLTQQND 1699
>XP_006716408
          Length = 2117

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1723 TLTQQND 1729
>XP_006716407
          Length = 2126

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1732 TLTQQND 1738
>XP_006716406
          Length = 2131

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1737 TLTQQND 1743
>XP_006716405
          Length = 2138

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1744 TLTQQND 1750
>XP_006716404
          Length = 2142

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1748 TLTQQND 1754
>XP_006716403
          Length = 2146

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1752 TLTQQND 1758
>XP_006716402
          Length = 2149

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1755 TLTQQND 1761
>XP_006716401
          Length = 2150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1756 TLTQQND 1762
>XP_006716400
          Length = 2150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1756 TLTQQND 1762
>XP_006716399
          Length = 2150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    TVTDQND 9
            T+T QND
Sbjct: 1756 TLTQQND 1762
>XP_006713163
          Length = 4265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1959 MNTVLDDN 1966
>XP_006713081
          Length = 3964

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1651 MNTVLDDN 1658
>XP_006712019
          Length = 4158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1849 MNTVLDDN 1856
>XP_006711565
          Length = 701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 528 VNTVTDDD 535
>XP_006711563
          Length = 918

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 745 VNTVTDDD 752
>XP_006711562
          Length = 918

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 745 VNTVTDDD 752
>XP_006711561
          Length = 1013

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LNTVTDQN 8
           +NTVTD +
Sbjct: 840 VNTVTDDD 847
>NP_061720
          Length = 4024

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    LNTVTDQN 8
            +NTV D N
Sbjct: 1703 MNTVLDDN 1710
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.300    0.119    0.314 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 496,213
Number of extensions: 804
Number of successful extensions: 108
Number of sequences better than 10000.0: 107
Number of HSP's gapped: 108
Number of HSP's successfully gapped: 108
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package