Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155048 18 1935 NP_056404 18 1935 NP_001245348 17 4312 NP_065980 17 4312 NP_065904 17 4312 NP_056493 16 5631 NP_001123465 16 5631 NP_872393 16 5631 XP_006719869 16 5631 XP_006719868 16 5631 XP_005266409 16 5631 XP_005266408 16 5631 XP_005266407 16 5631 XP_005266403 16 5631 XP_006719867 16 5631 XP_006719866 16 5631 XP_005266405 16 5631 XP_005266404 16 5631 XP_006712515 16 5631 XP_006712513 16 5631 XP_006712512 16 5631 XP_006712511 16 5631 XP_006712510 16 5631 XP_006712509 16 5631 XP_005246533 16 5631 XP_006712508 16 5631 XP_005264664 16 5631 XP_005264663 16 5631 XP_005264662 16 5631 NP_115895 16 5631 NP_115893 16 5631 NP_055330 16 7355 NP_001186231 16 7355 NP_001002796 16 7355 NP_078993 16 7355 NP_001186232 16 7355 XP_005257998 16 7355 XP_005257995 16 7355 XP_005257994 16 7355 XP_006719496 16 7355 XP_006719495 16 7355 XP_006719494 16 7355 XP_006719493 16 7355 XP_006719492 16 7355 XP_005272148 16 7355 XP_005272147 16 7355 XP_006714755 16 7355 XP_005272145 16 7355 XP_005272144 16 7355 XP_005272143 16 7355 XP_005272142 16 7355 XP_005272141 16 7355 XP_005272140 16 7355 XP_005272139 16 7355 NP_001273 16 7355 NP_001025177 16 7355 NP_000892 15 9605 NP_001159576 15 9605 NP_112092 15 9605 NP_849157 15 9605 NP_663612 15 9605 XP_006724281 15 9605 XP_006724280 15 9605 XP_006714285 15 9605 XP_005263071 15 9605 XP_006714159 15 9605 XP_006714158 15 9605 XP_006714157 15 9605>NP_001155048 Length = 630 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 +NT+GT+T+ Sbjct: 229 INTIGTSTS 237>NP_056404 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 +NT+GT+T+ Sbjct: 229 INTIGTSTS 237>NP_001245348 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 N+VG TTA Sbjct: 430 NSVGNTTA 437>NP_065980 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 N+VG TTA Sbjct: 430 NSVGNTTA 437>NP_065904 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTVGTTTA 9 NT GT TA Sbjct: 538 NTTGTVTA 545>NP_056493 Length = 2946 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>NP_001123465 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LNTVGT 6 LNTVGT Sbjct: 430 LNTVGT 435>NP_872393 Length = 3234 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2916 ISTVGTSTS 2924>XP_006719869 Length = 2943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1802 VTTVGATTA 1810>XP_006719868 Length = 2938 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1802 VTTVGATTA 1810>XP_005266409 Length = 1430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 268 VTTVGATTA 276>XP_005266408 Length = 1934 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>XP_005266407 Length = 2641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1479 VTTVGATTA 1487>XP_005266403 Length = 2941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>XP_006719867 Length = 2961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>XP_006719866 Length = 2962 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>XP_005266405 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1802 VTTVGATTA 1810>XP_005266404 Length = 2967 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 + TVG TTA Sbjct: 1805 VTTVGATTA 1813>XP_006712515 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2914 ISTVGTSTS 2922>XP_006712513 Length = 3220 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2883 ISTVGTSTS 2891>XP_006712512 Length = 3237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2919 ISTVGTSTS 2927>XP_006712511 Length = 3256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2919 ISTVGTSTS 2927>XP_006712510 Length = 3305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2987 ISTVGTSTS 2995>XP_006712509 Length = 3319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2982 ISTVGTSTS 2990>XP_005246533 Length = 3323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2986 ISTVGTSTS 2994>XP_006712508 Length = 3324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2987 ISTVGTSTS 2995>XP_005264664 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LNTVGT 6 LNTVGT Sbjct: 284 LNTVGT 289>XP_005264663 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LNTVGT 6 LNTVGT Sbjct: 430 LNTVGT 435>XP_005264662 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LNTVGT 6 LNTVGT Sbjct: 430 LNTVGT 435>NP_115895 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LNTVGT 6 LNTVGT Sbjct: 430 LNTVGT 435>NP_115893 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LNTVGTTTA 9 ++TVGT+T+ Sbjct: 2921 ISTVGTSTS 2929>NP_055330 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 302 LNTSGKTTS 310>NP_001186231 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 302 LNTSGKTTS 310>NP_001002796 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 22 INTAGTSNA 30>NP_078993 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 243 INTAGTSNA 251>NP_001186232 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 302 LNTSGKTTS 310>XP_005257998 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VGTTTA 9 VGTTTA Sbjct: 607 VGTTTA 612>XP_005257995 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VGTTTA 9 VGTTTA Sbjct: 607 VGTTTA 612>XP_005257994 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VGTTTA 9 VGTTTA Sbjct: 607 VGTTTA 612>XP_006719496 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 165 LNTSGKTTS 173>XP_006719495 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 241 LNTSGKTTS 249>XP_006719494 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 293 LNTSGKTTS 301>XP_006719493 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 293 LNTSGKTTS 301>XP_006719492 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 LNT G TT+ Sbjct: 293 LNTSGKTTS 301>XP_005272148 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 22 INTAGTSNA 30>XP_005272147 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 22 INTAGTSNA 30>XP_006714755 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272145 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272144 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272143 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272142 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272141 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272140 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>XP_005272139 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVGTTTA 9 +NT GT+ A Sbjct: 37 INTAGTSNA 45>NP_001273 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VGTTTA 9 VGTTTA Sbjct: 607 VGTTTA 612>NP_001025177 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VGTTTA 9 VGTTTA Sbjct: 607 VGTTTA 612>NP_000892 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVGTTTA 9 +N+V +TTA Sbjct: 210 INSVSSTTA 218>NP_001159576 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVGTTTA 9 +N+V +TTA Sbjct: 210 INSVSSTTA 218>NP_112092 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVGTTT 8 N+VGTT+ Sbjct: 121 NSVGTTS 127>NP_849157 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 NT+ TTT+ Sbjct: 753 NTIRTTTS 760>NP_663612 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVGTTT 8 N+VGTT+ Sbjct: 121 NSVGTTS 127>XP_006724281 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVGTTT 8 N+VGTT+ Sbjct: 121 NSVGTTS 127>XP_006724280 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVGTTT 8 N+VGTT+ Sbjct: 199 NSVGTTS 205>XP_006714285 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVGTTTA 9 +N+V +TTA Sbjct: 210 INSVSSTTA 218>XP_005263071 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVGTTTA 9 +N+V +TTA Sbjct: 210 INSVSSTTA 218>XP_006714159 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 NT+ TTT+ Sbjct: 753 NTIRTTTS 760>XP_006714158 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 NT+ TTT+ Sbjct: 753 NTIRTTTS 760>XP_006714157 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVGTTTA 9 NT+ TTT+ Sbjct: 753 NTIRTTTS 760Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.113 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,742 Number of extensions: 528 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |