Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 20 390 NP_958439 20 390 NP_958440 20 390 NP_005219 20 390 NP_061963 18 1935 NP_689479 17 4312 NP_776175 17 4312 NP_001122089 17 4312 NP_114128 17 4312 NP_001273541 17 4312 NP_001273540 17 4312 XP_005259451 17 4312 XP_005259450 17 4312 XP_005254368 17 4312 XP_005254367 17 4312 XP_006720536 17 4312 XP_005267236 17 4312 XP_005267235 17 4312 XP_006715650 17 4312 XP_005267234 17 4312 NP_060795 16 5631 NP_001242983 16 5631 XP_006716802 16 5631 NP_055968 16 7355 NP_859063 16 7355 NP_001277188 16 7355 NP_663320 16 7355 NP_001070730 16 7355 NP_892120 16 7355 XP_006715490 16 7355 XP_005248760 16 7355 XP_005248759 16 7355 XP_006715489 16 7355 XP_005248758 16 7355 NP_001138427 15 9605 NP_064619 15 9605 NP_056366 15 9605 NP_001982 15 9605 NP_114141 15 9605 NP_115796 15 9605 XP_005257201 15 9605 XP_005254619 15 9605 XP_005254618 15 9605 XP_005268513 15 9605 XP_005268512 15 9605 XP_005268510 15 9605 XP_005268509 15 9605 XP_005265092 15 9605 XP_005265091 15 9605 NP_005297 15 9605>NP_958441 Length = 705 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNTVEQIPL 9 LNTVE+IPL Sbjct: 93 LNTVERIPL 101>NP_958439 Length = 628 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNTVEQIPL 9 LNTVE+IPL Sbjct: 93 LNTVERIPL 101>NP_958440 Length = 405 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNTVEQIPL 9 LNTVE+IPL Sbjct: 93 LNTVERIPL 101>NP_005219 Length = 1210 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNTVEQIPL 9 LNTVE+IPL Sbjct: 93 LNTVERIPL 101>NP_061963 Length = 1047 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NT+ Q+PL Sbjct: 531 INTIRQLPL 539>NP_689479 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 L TV+QIP Sbjct: 160 LRTVQQIP 167>NP_776175 Length = 1150 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVEQIPL 9 NT+E +PL Sbjct: 511 NTLEDVPL 518>NP_001122089 Length = 769 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>NP_114128 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>NP_001273541 Length = 705 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>NP_001273540 Length = 796 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>XP_005259451 Length = 120 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 L TV+QIP Sbjct: 65 LRTVQQIP 72>XP_005259450 Length = 172 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 L TV+QIP Sbjct: 117 LRTVQQIP 124>XP_005254368 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVEQIPL 9 NT+E +PL Sbjct: 511 NTLEDVPL 518>XP_005254367 Length = 1031 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVEQIPL 9 NT+E +PL Sbjct: 392 NTLEDVPL 399>XP_006720536 Length = 1072 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTVEQIPL 9 NT+E +PL Sbjct: 433 NTLEDVPL 440>XP_005267236 Length = 768 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>XP_005267235 Length = 773 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>XP_006715650 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>XP_005267234 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 +NTV+ +PL Sbjct: 90 INTVKDLPL 98>NP_060795 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNTVEQIP 8 +NTV+Q+P Sbjct: 312 VNTVKQMP 319>NP_001242983 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNTVEQIP 8 +NTV+Q+P Sbjct: 312 VNTVKQMP 319>XP_006716802 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNTVEQIP 8 +NTV+Q+P Sbjct: 312 VNTVKQMP 319>NP_055968 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 1491 NTVKEIP 1497>NP_859063 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NTVEQIPL 9 NT+++IP+ Sbjct: 50 NTIKRIPI 57>NP_001277188 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 1403 NTVKEIP 1409>NP_663320 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVEQIPL 9 L T+E IPL Sbjct: 194 LRTLEPIPL 202>NP_001070730 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVEQIPL 9 L T+E IPL Sbjct: 107 LRTLEPIPL 115>NP_892120 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNTVEQIPL 9 L T+E IPL Sbjct: 227 LRTLEPIPL 235>XP_006715490 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 633 NTVKEIP 639>XP_005248760 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 760 NTVKEIP 766>XP_005248759 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 1403 NTVKEIP 1409>XP_006715489 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 1491 NTVKEIP 1497>XP_005248758 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTVEQIP 8 NTV++IP Sbjct: 1491 NTVKEIP 1497>NP_001138427 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEQIPL 9 +EQIPL Sbjct: 81 IEQIPL 86>NP_064619 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEQIPL 9 +EQIPL Sbjct: 81 IEQIPL 86>NP_056366 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 +NTV+Q P Sbjct: 500 VNTVKQTP 507>NP_001982 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVEQIPL 9 LNTV +P+ Sbjct: 102 LNTVALVPI 110>NP_114141 Length = 5635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNTVEQIPL 9 L+T+E IP+ Sbjct: 990 LSTIEGIPV 998>NP_115796 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVEQIPL 9 T+E+IPL Sbjct: 1207 TLEEIPL 1213>XP_005257201 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNTVEQIPL 9 LNTV +P+ Sbjct: 108 LNTVALVPI 116>XP_005254619 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEQIPL 9 +EQIPL Sbjct: 81 IEQIPL 86>XP_005254618 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEQIPL 9 +EQIPL Sbjct: 81 IEQIPL 86>XP_005268513 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVEQIPL 9 T+E+IPL Sbjct: 828 TLEEIPL 834>XP_005268512 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVEQIPL 9 T+E+IPL Sbjct: 828 TLEEIPL 834>XP_005268510 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVEQIPL 9 T+E+IPL Sbjct: 1185 TLEEIPL 1191>XP_005268509 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVEQIPL 9 T+E+IPL Sbjct: 1251 TLEEIPL 1257>XP_005265092 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 +NTV+Q P Sbjct: 322 VNTVKQTP 329>XP_005265091 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LNTVEQIP 8 +NTV+Q P Sbjct: 437 VNTVKQTP 444>NP_005297 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LNTVEQI 7 LNT EQ+ Sbjct: 150 LNTTEQV 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.137 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,205 Number of extensions: 810 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |