Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_002438 17 3301 NP_001231866 17 3301 XP_005265227 17 3301 NP_077017 17 3301 NP_001186862 17 4312 NP_055269 17 4312 NP_001186863 17 4312 NP_000072 16 7355 NP_001140 16 7355 NP_001191332 16 7355 NP_001191333 16 7355 NP_066267 16 7355 NP_055426 16 7355 NP_078928 16 7355 XP_005255036 16 7355 XP_005269773 16 7355 XP_006717866 16 7355 XP_005269772 16 7355 XP_006717865 16 7355 XP_006717864 16 7355 XP_006717863 16 7355 XP_006717862 16 7355 XP_006717861 16 7355 XP_006717860 16 7355 XP_006717859 16 7355 XP_006717858 16 7355 XP_006717857 16 7355 XP_006717856 16 7355 XP_006717855 16 7355 XP_006717854 16 7355 XP_006717853 16 7355 XP_006717852 16 7355 XP_006717851 16 7355 XP_006717850 16 7355 XP_006717849 16 7355 XP_006717848 16 7355 XP_006717847 16 7355 XP_006717846 16 7355 XP_006717845 16 7355 XP_005248757 16 7355 XP_006715468 16 7355 XP_005248756 16 7355 XP_006715467 16 7355 XP_005273087 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_001009899 15 9605 NP_057308 15 9605 NP_062552 15 9605 NP_001276915 15 9605 NP_001265539 15 9605 NP_002457 15 9605 NP_653285 15 9605 NP_002009 15 9605 NP_060328 15 9605 NP_001243193 15 9605 NP_001269979 15 9605 NP_001269980 15 9605 NP_001269981 15 9605 NP_056074 15 9605 NP_001243194 15 9605 XP_005261155 15 9605 XP_006723963 15 9605 XP_006723962 15 9605 XP_006723081 15 9605 XP_005256615 15 9605 XP_005256613 15 9605 XP_005256612 15 9605 XP_006720657 15 9605 XP_005254579 15 9605 XP_005254578 15 9605 XP_006720656 15 9605 XP_005267072 15 9605 XP_005247265 15 9605 XP_006710171 15 9605 XP_006710170 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 LN MLDQSF Sbjct: 1597 LNGMLDQSF 1605>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 LN MLDQSF Sbjct: 1597 LNGMLDQSF 1605>NP_002438 Length = 1400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 N MLD+SF Sbjct: 1213 NCMLDESF 1220>NP_001231866 Length = 1351 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 N MLD+SF Sbjct: 1164 NCMLDESF 1171>XP_005265227 Length = 1401 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 N MLD+SF Sbjct: 1214 NCMLDESF 1221>NP_077017 Length = 83 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNSMLDQ 7 +NSMLDQ Sbjct: 31 INSMLDQ 37>NP_001186862 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 +N +LD+SF Sbjct: 425 INQLLDRSF 433>NP_055269 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 +N +LD+SF Sbjct: 484 INQLLDRSF 492>NP_001186863 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 +N +LD+SF Sbjct: 359 INQLLDRSF 367>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNSMLDQS 8 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>NP_001140 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 649 NSLISQSF 656>NP_001191332 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1509 NSLISQSF 1516>NP_001191333 Length = 1868 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1516 NSLISQSF 1523>NP_066267 Length = 4377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4128 NSLISQSF 4135>NP_055426 Length = 5596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSMLDQSF 9 N MLD+ F Sbjct: 4493 NQMLDEGF 4500>NP_078928 Length = 2015 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 +NS++DQ F Sbjct: 1137 VNSLIDQWF 1145>XP_005255036 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNSMLDQSF 9 +NS++DQ F Sbjct: 432 VNSLIDQWF 440>XP_005269773 Length = 1867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1515 NSLISQSF 1522>XP_006717866 Length = 1877 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1533 NSLISQSF 1540>XP_005269772 Length = 1885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1533 NSLISQSF 1540>XP_006717865 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1546 NSLISQSF 1553>XP_006717864 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1537 NSLISQSF 1544>XP_006717863 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1525 NSLISQSF 1532>XP_006717862 Length = 1981 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1534 NSLISQSF 1541>XP_006717861 Length = 1984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1537 NSLISQSF 1544>XP_006717860 Length = 1993 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 1546 NSLISQSF 1553>XP_006717859 Length = 2758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717858 Length = 2775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717857 Length = 2794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717856 Length = 2833 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717855 Length = 2837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717854 Length = 2852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717853 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 2407 NSLISQSF 2414>XP_006717852 Length = 3508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 3259 NSLISQSF 3266>XP_006717851 Length = 3513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 3264 NSLISQSF 3271>XP_006717850 Length = 4364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4115 NSLISQSF 4122>XP_006717849 Length = 4383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4134 NSLISQSF 4141>XP_006717848 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4143 NSLISQSF 4150>XP_006717847 Length = 4395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4146 NSLISQSF 4153>XP_006717846 Length = 4396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4147 NSLISQSF 4154>XP_006717845 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS++ QSF Sbjct: 4148 NSLISQSF 4155>XP_005248757 Length = 3591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSMLDQSF 9 N MLD+ F Sbjct: 2488 NQMLDEGF 2495>XP_006715468 Length = 3744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSMLDQSF 9 N MLD+ F Sbjct: 2641 NQMLDEGF 2648>XP_005248756 Length = 3905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSMLDQSF 9 N MLD+ F Sbjct: 2802 NQMLDEGF 2809>XP_006715467 Length = 5550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSMLDQSF 9 N MLD+ F Sbjct: 4493 NQMLDEGF 4500>XP_005273087 Length = 2788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNSMLDQS 8 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNSMLDQS 8 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNSMLDQS 8 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LNSMLDQS 8 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>NP_001009899 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 N +LDQ+F Sbjct: 56 NMILDQAF 63>NP_057308 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS+ DQ+F Sbjct: 72 NSVADQAF 79>NP_062552 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LNSMLDQ 7 LNS+LD+ Sbjct: 197 LNSLLDE 203>NP_001276915 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 176 TLLDQSF 182>NP_001265539 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS+L+Q F Sbjct: 604 NSLLNQGF 611>NP_002457 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS+L+Q F Sbjct: 628 NSLLNQGF 635>NP_653285 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LNSMLDQ 7 +NSML+Q Sbjct: 75 INSMLEQ 81>NP_002009 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1121 LNTMFDTSY 1129>NP_060328 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 277 TLLDQSF 283>NP_001243193 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1110 LNTMFDTSY 1118>NP_001269979 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>NP_001269980 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 60 NSLLDQA 66>NP_001269981 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 92 NSLLDQA 98>NP_056074 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>NP_001243194 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1066 LNTMFDTSY 1074>XP_005261155 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723963 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723962 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723081 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LNSMLDQ 7 +NSML+Q Sbjct: 75 INSMLEQ 81>XP_005256615 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1120 LNTMFDTSY 1128>XP_005256613 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1120 LNTMFDTSY 1128>XP_005256612 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNSMLDQSF 9 LN+M D S+ Sbjct: 1121 LNTMFDTSY 1129>XP_006720657 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 277 TLLDQSF 283>XP_005254579 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 277 TLLDQSF 283>XP_005254578 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 277 TLLDQSF 283>XP_006720656 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMLDQSF 9 ++LDQSF Sbjct: 277 TLLDQSF 283>XP_005267072 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 NS+ DQ+F Sbjct: 65 NSVADQAF 72>XP_005247265 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMLDQSF 9 N +LDQ+F Sbjct: 22 NMILDQAF 29>XP_006710171 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006710170 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMLDQS 8 NS+LDQ+ Sbjct: 177 NSLLDQA 183Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,569 Number of extensions: 751 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |