Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 XP_005251866 19 665 XP_005251865 19 665 XP_005251864 19 665 NP_055745 19 665 NP_115518 17 2528 XP_006722394 17 2528 XP_005258167 17 2528 XP_006722393 17 2528 XP_006722392 17 2528 XP_006722391 17 2528 XP_006722390 17 2528 XP_005258166 17 2528 XP_006722389 17 2528 XP_005258165 17 2528 XP_005258164 17 2528 NP_065853 17 3301 XP_005271684 17 3301 NP_006232 17 4312 NP_001182741 17 4312 NP_689879 17 4312 NP_001182740 17 4312 XP_006713746 17 4312 XP_006713745 17 4312 XP_006711815 17 4312 NP_002684 16 5631 NP_001119603 16 5631 NP_775866 16 5631 NP_072174 16 5631 XP_006712785 16 5631 XP_005246883 16 5631 XP_005246882 16 5631 XP_006712784 16 5631 NP_000531 16 7355 NP_001036188 16 7355 NP_061330 16 7355 NP_060069 16 7355 NP_001273654 16 7355 NP_065917 16 7355 NP_055646 16 7355 XP_006723382 16 7355 XP_006723381 16 7355 XP_006723380 16 7355 XP_006719549 16 7355 XP_006719548 16 7355 XP_006719547 16 7355 XP_006719546 16 7355 XP_006719545 16 7355 XP_006719544 16 7355 XP_006719543 16 7355 XP_006719542 16 7355 XP_006719541 16 7355 XP_006719540 16 7355 XP_006713495 16 7355 NP_001012302 15 9605 NP_671692 15 9605 XP_006718283 15 9605 XP_006718282 15 9605 NP_064617 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNNKTATTE 9 L+NKTATTE Sbjct: 897 LDNKTATTE 905>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNNKTATTE 9 L+NKTATTE Sbjct: 692 LDNKTATTE 700>XP_005251866 Length = 621 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 +NNKT TTE Sbjct: 81 INNKTLTTE 89>XP_005251865 Length = 682 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 +NNKT TTE Sbjct: 142 INNKTLTTE 150>XP_005251864 Length = 683 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 +NNKT TTE Sbjct: 143 INNKTLTTE 151>NP_055745 Length = 683 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 +NNKT TTE Sbjct: 143 INNKTLTTE 151>NP_115518 Length = 2537 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1972 INNKTAT 1978>XP_006722394 Length = 1845 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1279 INNKTAT 1285>XP_005258167 Length = 1856 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1290 INNKTAT 1296>XP_006722393 Length = 2199 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1633 INNKTAT 1639>XP_006722392 Length = 2444 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1878 INNKTAT 1884>XP_006722391 Length = 2448 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1882 INNKTAT 1888>XP_006722390 Length = 2467 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1902 INNKTAT 1908>XP_005258166 Length = 2468 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1902 INNKTAT 1908>XP_006722389 Length = 2506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1972 INNKTAT 1978>XP_005258165 Length = 2534 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1968 INNKTAT 1974>XP_005258164 Length = 2538 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LNNKTAT 7 +NNKTAT Sbjct: 1972 INNKTAT 1978>NP_065853 Length = 1117 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 L NKT TT+ Sbjct: 649 LKNKTGTTQ 657>XP_005271684 Length = 1081 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 L NKT TT+ Sbjct: 649 LKNKTGTTQ 657>NP_006232 Length = 205 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L NKT+TT Sbjct: 15 LKNKTSTT 22>NP_001182741 Length = 328 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 L+NKTAT + Sbjct: 311 LSNKTATDD 319>NP_689879 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 L+NKTAT + Sbjct: 519 LSNKTATDD 527>NP_001182740 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 L+NKTAT + Sbjct: 457 LSNKTATDD 465>XP_006713746 Length = 108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L NKT+TT Sbjct: 15 LKNKTSTT 22>XP_006713745 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L NKT+TT Sbjct: 15 LKNKTSTT 22>XP_006711815 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 L+NKTAT + Sbjct: 519 LSNKTATDD 527>NP_002684 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LNNKTATT 8 L++KTATT Sbjct: 931 LHSKTATT 938>NP_001119603 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LNNKTATT 8 L++KTATT Sbjct: 931 LHSKTATT 938>NP_775866 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNNKTATTE 9 +NN+ +TTE Sbjct: 832 INNQDSTTE 840>NP_072174 Length = 1735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L+NK ATT Sbjct: 1259 LHNKVATT 1266>XP_006712785 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L+NK ATT Sbjct: 876 LHNKVATT 883>XP_005246883 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L+NK ATT Sbjct: 876 LHNKVATT 883>XP_005246882 Length = 1518 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L+NK ATT Sbjct: 1042 LHNKVATT 1049>XP_006712784 Length = 1784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LNNKTATT 8 L+NK ATT Sbjct: 1308 LHNKVATT 1315>NP_000531 Length = 5038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 N K ATTE Sbjct: 1374 NEKDATTE 1381>NP_001036188 Length = 5033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 N K ATTE Sbjct: 1374 NEKDATTE 1381>NP_061330 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 +NN T T+E Sbjct: 314 VNNSTGTSE 322>NP_060069 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 648 SNKSATTD 655>NP_001273654 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNKTATT 8 NNK ATT Sbjct: 408 NNKGATT 414>NP_065917 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNKTATT 8 NNK ATT Sbjct: 469 NNKGATT 475>NP_055646 Length = 2925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 LN+ TAT E Sbjct: 997 LNDTTATVE 1005>XP_006723382 Length = 5027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 N K ATTE Sbjct: 1374 NEKDATTE 1381>XP_006723381 Length = 5031 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 N K ATTE Sbjct: 1373 NEKDATTE 1380>XP_006723380 Length = 5032 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 N K ATTE Sbjct: 1374 NEKDATTE 1381>XP_006719549 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 500 SNKSATTD 507>XP_006719548 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 504 SNKSATTD 511>XP_006719547 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 504 SNKSATTD 511>XP_006719546 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 504 SNKSATTD 511>XP_006719545 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 574 SNKSATTD 581>XP_006719544 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 574 SNKSATTD 581>XP_006719543 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 604 SNKSATTD 611>XP_006719542 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 604 SNKSATTD 611>XP_006719541 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 622 SNKSATTD 629>XP_006719540 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNKTATTE 9 +NK+ATT+ Sbjct: 652 SNKSATTD 659>XP_006713495 Length = 2969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 LN+ TAT E Sbjct: 1041 LNDTTATVE 1049>NP_001012302 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 +NNKT+ E Sbjct: 128 MNNKTSAGE 136>NP_671692 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 NN ATTE Sbjct: 27 NNPYATTE 34>XP_006718283 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 +NNKT+ E Sbjct: 128 MNNKTSAGE 136>XP_006718282 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LNNKTATTE 9 +NNKT+ E Sbjct: 128 MNNKTSAGE 136>NP_064617 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKTATTE 9 NN ATTE Sbjct: 58 NNPYATTE 65Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.101 0.241 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,889 Number of extensions: 652 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |