Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 22 134 NP_001075109 22 134 NP_775873 18 1935 XP_006719585 18 1935 XP_006719584 18 1935 XP_005269101 18 1935 XP_006719583 18 1935 NP_000543 17 4312 NP_062815 16 5631 NP_079128 16 5631 NP_001258875 16 5631 NP_003053 16 5631 NP_002799 16 5631 NP_001265637 16 5631 NP_001265638 16 5631 NP_803171 16 5631 XP_005270633 16 5631 XP_006710467 16 5631 XP_005270632 16 5631 NP_277052 16 7355 NP_055935 16 7355 NP_056083 16 7355 XP_006716621 16 7355 XP_005250973 16 7355 XP_005250972 16 7355 XP_006716620 16 7355 XP_006716619 16 7355 XP_005247302 16 7355 NP_976324 16 7355 NP_001275582 15 9605 NP_055507 15 9605 NP_004850 15 9605 NP_056019 15 9605 NP_001364 15 9605 NP_056377 15 9605 NP_005079 15 9605 NP_079216 15 9605 XP_005257069 15 9605 XP_005271598 15 9605 XP_005273708 15 9605 XP_006716465 15 9605 XP_005273707 15 9605 XP_006715725 15 9605 XP_006715724 15 9605 XP_006715723 15 9605 XP_006715722 15 9605 XP_006711798 15 9605 XP_005270437 15 9605 NP_006408 15 9605>NP_008835 Length = 4128 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMYKGSNRT 9 LMYKG+NRT Sbjct: 3857 LMYKGANRT 3865>NP_001075109 Length = 4097 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMYKGSNRT 9 LMYKG+NRT Sbjct: 3826 LMYKGANRT 3834>NP_775873 Length = 1576 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MYKGSNRT 9 M+KGSNR+ Sbjct: 251 MHKGSNRS 258>XP_006719585 Length = 1459 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MYKGSNRT 9 M+KGSNR+ Sbjct: 133 MHKGSNRS 140>XP_006719584 Length = 1515 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MYKGSNRT 9 M+KGSNR+ Sbjct: 190 MHKGSNRS 197>XP_005269101 Length = 1577 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MYKGSNRT 9 M+KGSNR+ Sbjct: 251 MHKGSNRS 258>XP_006719583 Length = 1586 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MYKGSNRT 9 M+KGSNR+ Sbjct: 261 MHKGSNRS 268>NP_000543 Length = 2813 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LMYKGSNRT 9 + Y+G NRT Sbjct: 1568 IRYQGGNRT 1576>NP_062815 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LMYKGSNRT 9 L ++G NRT Sbjct: 352 LKFRGGNRT 360>NP_079128 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LMYKGSNRT 9 L Y G NRT Sbjct: 419 LQYGGRNRT 427>NP_001258875 Length = 1530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 L+YKG N Sbjct: 1202 LLYKGDN 1208>NP_003053 Length = 1523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 L+YKG N Sbjct: 1195 LLYKGDN 1201>NP_002799 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LMYKGSNR 8 L Y GSNR Sbjct: 487 LAYAGSNR 494>NP_001265637 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LMYKGSNR 8 L Y GSNR Sbjct: 357 LAYAGSNR 364>NP_001265638 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LMYKGSNR 8 L Y GSNR Sbjct: 328 LAYAGSNR 335>NP_803171 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LMYKGSNRT 9 L Y G NRT Sbjct: 185 LQYGGRNRT 193>XP_005270633 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LMYKGSNRT 9 L Y G NRT Sbjct: 144 LQYGGRNRT 152>XP_006710467 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LMYKGSNRT 9 L Y G NRT Sbjct: 185 LQYGGRNRT 193>XP_005270632 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LMYKGSNRT 9 L Y G NRT Sbjct: 419 LQYGGRNRT 427>NP_277052 Length = 1731 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LMYKGSNR 8 L+++G+NR Sbjct: 302 LLFRGANR 309>NP_055935 Length = 4169 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMYKGSNRT 9 ++Y+G++RT Sbjct: 121 IVYQGNSRT 129>NP_056083 Length = 2243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 +MY GSN Sbjct: 1129 MMYTGSN 1135>XP_006716621 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>XP_005250973 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>XP_005250972 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>XP_006716620 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>XP_006716619 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>XP_005247302 Length = 2248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 +MY GSN Sbjct: 1134 MMYTGSN 1140>NP_976324 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MYKGSNRT 9 +YK NRT Sbjct: 317 LYKDENRT 324>NP_001275582 Length = 1679 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MYKGSNR 8 ++KG+NR Sbjct: 1518 LFKGNNR 1524>NP_055507 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 L+Y GSN Sbjct: 448 LIYSGSN 454>NP_004850 Length = 1675 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MYKGSNR 8 ++KG+NR Sbjct: 1514 LFKGNNR 1520>NP_056019 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YKGSNRT 9 +KGS+RT Sbjct: 1484 WKGSSRT 1490>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 YKGSN 7 YKGSN Sbjct: 3817 YKGSN 3821>NP_056377 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMYKGSNRT 9 LM+KGS T Sbjct: 148 LMHKGSFET 156>NP_005079 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LMYKGSN 7 LMYKG + Sbjct: 239 LMYKGED 245>NP_079216 Length = 1870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LMYKGSNR 8 ++YKG N+ Sbjct: 570 VVYKGDNK 577>XP_005257069 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MYKGSNR 8 ++KG+NR Sbjct: 1514 LFKGNNR 1520>XP_005271598 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YKGSNRT 9 +KG NRT Sbjct: 188 WKGMNRT 194>XP_005273708 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LMYKGSNR 8 ++YKG N+ Sbjct: 284 VVYKGDNK 291>XP_006716465 Length = 1826 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LMYKGSNR 8 ++YKG N+ Sbjct: 570 VVYKGDNK 577>XP_005273707 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LMYKGSNR 8 ++YKG N+ Sbjct: 570 VVYKGDNK 577>XP_006715725 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YKGSNRT 9 +KGS+RT Sbjct: 1484 WKGSSRT 1490>XP_006715724 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YKGSNRT 9 +KGS+RT Sbjct: 1484 WKGSSRT 1490>XP_006715723 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YKGSNRT 9 +KGS+RT Sbjct: 1484 WKGSSRT 1490>XP_006715722 Length = 1614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YKGSNRT 9 +KGS+RT Sbjct: 1484 WKGSSRT 1490>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 YKGSN 7 YKGSN Sbjct: 3879 YKGSN 3883>XP_005270437 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LMYKGS 6 L+YKGS Sbjct: 26 LLYKGS 31>NP_006408 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LMYKGS 6 L+YKGS Sbjct: 26 LLYKGS 31Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.128 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 585,571 Number of extensions: 981 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |