Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_001010904 17 4312 NP_079229 16 5631 XP_005253995 16 5631 XP_006719669 16 5631 NP_060897 16 7355 NP_057302 16 7355 XP_006725262 16 7355 XP_006725261 16 7355 XP_006725260 16 7355 XP_005255434 16 7355 XP_005255433 16 7355 XP_005255432 16 7355 XP_005248593 16 7355 XP_006714714 16 7355 XP_006714713 16 7355 XP_005248591 16 7355 NP_005049 15 9605 NP_001269 15 9605 NP_872302 15 9605 NP_001006121 15 9605 NP_689798 15 9605 NP_002080 15 9605 NP_001006118 15 9605 XP_005262647 15 9605 XP_005262646 15 9605 XP_005262645 15 9605 XP_005262644 15 9605 XP_005262643 15 9605 XP_005262642 15 9605 XP_005262641 15 9605 XP_005262640 15 9605 XP_005262634 15 9605 XP_005262633 15 9605 XP_005262632 15 9605 XP_005262631 15 9605 XP_005262574 15 9605 XP_005262573 15 9605 XP_005262572 15 9605 XP_005262571 15 9605 XP_005262570 15 9605 XP_005262569 15 9605 XP_005262568 15 9605 XP_006719292 15 9605 NP_777592 15 9605 NP_001006117 15 9605 NP_001006120 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMVEKMLKA 9 L+VEKMLKA Sbjct: 3445 LVVEKMLKA 3453>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMVEKMLKA 9 L+VEKMLKA Sbjct: 3445 LVVEKMLKA 3453>NP_001010904 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LMVEKMLKA 9 L++EKMLK+ Sbjct: 11 LILEKMLKS 19>NP_079229 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MVEKMLK 8 MVEKM+K Sbjct: 180 MVEKMVK 186>XP_005253995 Length = 836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MVEKMLK 8 MVEKM+K Sbjct: 44 MVEKMVK 50>XP_006719669 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MVEKMLK 8 MVEKM+K Sbjct: 152 MVEKMVK 158>NP_060897 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 246 LIIEKLLK 253>NP_057302 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MVEKMLKA 9 + EKMLKA Sbjct: 360 VTEKMLKA 367>XP_006725262 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 34 LIIEKLLK 41>XP_006725261 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 34 LIIEKLLK 41>XP_006725260 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 216 LIIEKLLK 223>XP_005255434 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 34 LIIEKLLK 41>XP_005255433 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 34 LIIEKLLK 41>XP_005255432 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMVEKMLK 8 L++EK+LK Sbjct: 216 LIIEKLLK 223>XP_005248593 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MVEKMLKA 9 + EKMLKA Sbjct: 374 VTEKMLKA 381>XP_006714714 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MVEKMLKA 9 + EKMLKA Sbjct: 284 VTEKMLKA 291>XP_006714713 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MVEKMLKA 9 + EKMLKA Sbjct: 374 VTEKMLKA 381>XP_005248591 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MVEKMLKA 9 + EKMLKA Sbjct: 374 VTEKMLKA 381>NP_005049 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>NP_001269 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 505 EKMLKA 510>NP_872302 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 392 EKMLKA 397>NP_001006121 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>NP_689798 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>NP_002080 Length = 107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MVEKMLK 8 ++EKMLK Sbjct: 96 IIEKMLK 102>NP_001006118 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>XP_005262647 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262646 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262645 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262644 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262643 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262642 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>XP_005262641 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262640 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262634 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>XP_005262633 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262632 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262631 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262574 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262573 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>XP_005262572 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262571 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262570 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>XP_005262569 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_005262568 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 28 EKMLKA 33>XP_006719292 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 228 EKMLKA 233>NP_777592 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MVEKMLK 8 M+E+MLK Sbjct: 49 MIEQMLK 55>NP_001006117 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26>NP_001006120 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKMLKA 9 EKMLKA Sbjct: 21 EKMLKA 26Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.132 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,808 Number of extensions: 506 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |