Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065798 18 1935 XP_005272097 18 1935 XP_005272096 18 1935 XP_006714725 18 1935 XP_005272095 18 1935 XP_005272094 18 1935 NP_689854 17 3301 XP_006719336 17 3301 XP_006719335 17 3301 NP_001269166 16 7355 NP_001269167 16 7355 NP_001131140 16 7355 NP_036247 16 7355 NP_075049 16 7355 NP_060350 16 7355 NP_612808 16 7355 NP_001131139 16 7355 XP_005264448 16 7355 XP_005264447 16 7355 XP_005264446 16 7355 NP_079052 15 9605 NP_597721 15 9605 NP_073741 15 9605 NP_001103132 15 9605 NP_776189 15 9605 NP_001123501 15 9605 NP_055491 15 9605 NP_203751 15 9605 NP_001018494 15 9605 NP_002190 15 9605 NP_001138648 15 9605 NP_001273551 15 9605 XP_005254732 15 9605 XP_005254731 15 9605 XP_006720754 15 9605 XP_005254729 15 9605 XP_005254730 15 9605 XP_005254728 15 9605 XP_005254727 15 9605 XP_005268474 15 9605 XP_005268472 15 9605 XP_005268471 15 9605 XP_006714457 15 9605 XP_006714456 15 9605 XP_005263376 15 9605 XP_005263043 15 9605 XP_005263041 15 9605 NP_001005174 15 9605>NP_065798 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 316 ISSSLTPQ 323>XP_005272097 Length = 1224 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 28 ISSSLTPQ 35>XP_005272096 Length = 1511 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 316 ISSSLTPQ 323>XP_006714725 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 316 ISSSLTPQ 323>XP_005272095 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 316 ISSSLTPQ 323>XP_005272094 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 MSSSLTPQ 9 +SSSLTPQ Sbjct: 316 ISSSLTPQ 323>NP_689854 Length = 1835 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TPQ Sbjct: 988 MSSSSTPQ 995>XP_006719336 Length = 1779 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TPQ Sbjct: 932 MSSSSTPQ 939>XP_006719335 Length = 1793 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TPQ Sbjct: 988 MSSSSTPQ 995>NP_001269166 Length = 893 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLTPQ 9 SSSLTP+ Sbjct: 255 SSSLTPR 261>NP_001269167 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLTPQ 9 SSSLTP+ Sbjct: 184 SSSLTPR 190>NP_001131140 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TP+ Sbjct: 1463 MSSSSTPE 1470>NP_036247 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TP+ Sbjct: 1463 MSSSSTPE 1470>NP_075049 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLTPQ 9 SSSLTP+ Sbjct: 185 SSSLTPR 191>NP_060350 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 M+SSL PQ Sbjct: 315 MNSSLLPQ 322>NP_612808 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLTPQ 9 SSSLTP+ Sbjct: 256 SSSLTPR 262>NP_001131139 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 MSSS TP+ Sbjct: 1463 MSSSSTPE 1470>XP_005264448 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 M+SSL PQ Sbjct: 315 MNSSLLPQ 322>XP_005264447 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 M+SSL PQ Sbjct: 315 MNSSLLPQ 322>XP_005264446 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSSSLTPQ 9 M+SSL PQ Sbjct: 315 MNSSLLPQ 322>NP_079052 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>NP_597721 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 479 SSSLTP 484>NP_073741 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLTPQ 9 SSSL PQ Sbjct: 320 SSSLAPQ 326>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 3340 SSSLTP 3345>NP_776189 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMSSSLTPQ 9 L SSLTP+ Sbjct: 242 LRDSSLTPR 250>NP_001123501 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMSSSLTPQ 9 L SSLTP+ Sbjct: 242 LRDSSLTPR 250>NP_055491 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 721 SSSLTP 726>NP_203751 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 721 SSSLTP 726>NP_001018494 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 721 SSSLTP 726>NP_002190 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSSSLTP 8 +SSS+TP Sbjct: 313 LSSSMTP 319>NP_001138648 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 245 SSSLTP 250>NP_001273551 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 5 SSSLTP 10>XP_005254732 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005254731 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_006720754 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005254729 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005254730 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005254728 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005254727 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 511 SSSLTP 516>XP_005268474 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMSSSLTPQ 9 L SSLTP+ Sbjct: 242 LRDSSLTPR 250>XP_005268472 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMSSSLTPQ 9 L SSLTP+ Sbjct: 242 LRDSSLTPR 250>XP_005268471 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMSSSLTPQ 9 L SSLTP+ Sbjct: 242 LRDSSLTPR 250>XP_006714457 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 387 SSSLTP 392>XP_006714456 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 721 SSSLTP 726>XP_005263376 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 721 SSSLTP 726>XP_005263043 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSSSLTP 8 +SSS+TP Sbjct: 151 LSSSMTP 157>XP_005263041 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSSSLTP 8 +SSS+TP Sbjct: 311 LSSSMTP 317>NP_001005174 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSSLTP 8 SSSLTP Sbjct: 6 SSSLTP 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.109 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,481 Number of extensions: 990 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |