Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_060420 16 7355 NP_000313 16 7355 NP_001230271 16 7355 NP_005952 16 7355 XP_006725823 16 7355 XP_006725595 16 7355 XP_005257548 16 7355 XP_005249318 16 7355 NP_005742 15 9605 NP_671714 15 9605 NP_055912 15 9605 NP_001193973 15 9605 NP_065873 15 9605 NP_001258932 15 9605 XP_006724942 15 9605 XP_006721754 15 9605 XP_005257102 15 9605 XP_005257101 15 9605 XP_006721753 15 9605 XP_005257100 15 9605 XP_006717257 15 9605 XP_006717256 15 9605 XP_005250160 15 9605 XP_005250159 15 9605 XP_006713123 15 9605 XP_006713122 15 9605 XP_006713121 15 9605 XP_006713120 15 9605 XP_006713119 15 9605 XP_006713118 15 9605 XP_006713117 15 9605 XP_006713116 15 9605 XP_006713115 15 9605 XP_006713114 15 9605 XP_006713113 15 9605 XP_006713112 15 9605 XP_006713111 15 9605 XP_006713110 15 9605 XP_006713109 15 9605 XP_006713108 15 9605 XP_006713107 15 9605 XP_006713106 15 9605 XP_006713105 15 9605 XP_006713104 15 9605 XP_006713103 15 9605 XP_006713102 15 9605 XP_006713101 15 9605 XP_006713100 15 9605 XP_006713099 15 9605 XP_006710331 15 9605 NP_542938 15 9605 NP_775749 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 LM+SSVDNT Sbjct: 1582 LMQSSVDNT 1590>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 LM+SSVDNT Sbjct: 1582 LMQSSVDNT 1590>NP_060420 Length = 1142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRSSVDN 8 MRSSVD+ Sbjct: 920 MRSSVDS 926>NP_000313 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMRSSVDNT 9 L+R S++NT Sbjct: 121 LLRGSLENT 129>NP_001230271 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRSSVDN 8 MRSSVD+ Sbjct: 920 MRSSVDS 926>NP_005952 Length = 2439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSSVDN Sbjct: 654 RSSVDN 659>XP_006725823 Length = 1825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSSVDN Sbjct: 654 RSSVDN 659>XP_006725595 Length = 1311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSSVDN Sbjct: 654 RSSVDN 659>XP_005257548 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRSSVDN 8 MRSSVD+ Sbjct: 527 MRSSVDS 533>XP_005249318 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMRSSVDNT 9 L+R S++NT Sbjct: 121 LLRGSLENT 129>NP_005742 Length = 3907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSS+DN Sbjct: 1640 RSSIDN 1645>NP_671714 Length = 3899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSS+DN Sbjct: 1640 RSSIDN 1645>NP_055912 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 998 LMRFTVDQT 1006>NP_001193973 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 777 LMRFTVDQT 785>NP_065873 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LMRSSVDN 8 LMR+ +DN Sbjct: 442 LMRAKMDN 449>NP_001258932 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LMRSSVDN 8 LMR+ +DN Sbjct: 397 LMRAKMDN 404>XP_006724942 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSSVDNT 9 RSSVD T Sbjct: 211 RSSVDTT 217>XP_006721754 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 144 LLRASIENS 152>XP_005257102 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 144 LLRASIENS 152>XP_005257101 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 144 LLRASIENS 152>XP_006721753 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 227 LLRASIENS 235>XP_005257100 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 221 LLRASIENS 229>XP_006717257 Length = 1083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LMRSSVDN 8 LMR+ +DN Sbjct: 269 LMRAKMDN 276>XP_006717256 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LMRSSVDN 8 LMR+ +DN Sbjct: 358 LMRAKMDN 365>XP_005250160 Length = 3939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSS+DN Sbjct: 1640 RSSIDN 1645>XP_005250159 Length = 3952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RSSVDN 8 RSS+DN Sbjct: 1640 RSSIDN 1645>XP_006713123 Length = 1514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 997 LMRFTVDQT 1005>XP_006713122 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1028 LMRFTVDQT 1036>XP_006713121 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 769 LMRFTVDQT 777>XP_006713120 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 770 LMRFTVDQT 778>XP_006713119 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 791 LMRFTVDQT 799>XP_006713118 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 794 LMRFTVDQT 802>XP_006713117 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 800 LMRFTVDQT 808>XP_006713116 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 990 LMRFTVDQT 998>XP_006713115 Length = 1514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 997 LMRFTVDQT 1005>XP_006713114 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1006 LMRFTVDQT 1014>XP_006713113 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 990 LMRFTVDQT 998>XP_006713112 Length = 1527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1010 LMRFTVDQT 1018>XP_006713111 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 998 LMRFTVDQT 1006>XP_006713110 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 999 LMRFTVDQT 1007>XP_006713109 Length = 1537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1020 LMRFTVDQT 1028>XP_006713108 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1007 LMRFTVDQT 1015>XP_006713107 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1027 LMRFTVDQT 1035>XP_006713106 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1028 LMRFTVDQT 1036>XP_006713105 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1011 LMRFTVDQT 1019>XP_006713104 Length = 1552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1018 LMRFTVDQT 1026>XP_006713103 Length = 1553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1019 LMRFTVDQT 1027>XP_006713102 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1020 LMRFTVDQT 1028>XP_006713101 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1027 LMRFTVDQT 1035>XP_006713100 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1027 LMRFTVDQT 1035>XP_006713099 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LMRSSVDNT 9 LMR +VD T Sbjct: 1028 LMRFTVDQT 1036>XP_006710331 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSSVDNT 9 RSSVD T Sbjct: 211 RSSVDTT 217>NP_542938 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MRSSVDNT 9 M SSVD T Sbjct: 373 MNSSVDET 380>NP_775749 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LMRSSVDNT 9 L+R+S++N+ Sbjct: 227 LLRASIENS 235Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.117 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,385 Number of extensions: 625 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |