Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1935 NP_001075109 18 1935 NP_001127923 17 2528 NP_001127922 17 2528 NP_690877 17 2528 NP_057531 17 2528 NP_000360 17 2528 XP_005268094 17 2528 XP_005249832 17 2528 XP_006715803 17 2528 XP_006715802 17 2528 XP_006715801 17 2528 NP_620687 17 4312 NP_852111 17 4312 NP_000136 17 4312 NP_008880 16 5631 NP_001258963 16 5631 NP_001120868 16 5631 NP_001265305 16 5631 NP_001265310 16 5631 NP_001265299 16 5631 NP_001265302 16 5631 NP_001265301 16 5631 NP_001265303 16 5631 NP_001265304 16 5631 NP_005365 16 5631 NP_001265300 16 5631 XP_006722914 16 5631 XP_006721977 16 5631 XP_006721976 16 5631 XP_006721975 16 5631 NP_065386 16 7355 NP_060606 16 7355 NP_001193775 16 7355 NP_001136018 16 7355 NP_361013 16 7355 NP_002842 16 7355 NP_001193767 16 7355 XP_005268986 16 7355 XP_006716139 16 7355 XP_005250576 16 7355 NP_001193768 16 7355 NP_001128302 15 9605 NP_060121 15 9605 NP_004987 15 9605 NP_001128303 15 9605 NP_001128304 15 9605 NP_071431 15 9605 NP_653259 15 9605 XP_005262426 15 9605 XP_005262425 15 9605 XP_006720948 15 9605 XP_006720947 15 9605 XP_005255386 15 9605 XP_005255385 15 9605 XP_005255384 15 9605 XP_005267096 15 9605 XP_006715570 15 9605>NP_008835 Length = 4128 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 LL ITVRNA Sbjct: 669 LLSITVRNA 677>NP_001075109 Length = 4097 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 LL ITVRNA Sbjct: 669 LLSITVRNA 677>NP_001127923 Length = 321 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLYITVRNA 9 ++Y+T+RNA Sbjct: 255 IMYMTLRNA 263>NP_001127922 Length = 435 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLYITVRNA 9 ++Y+T+RNA Sbjct: 357 IMYMTLRNA 365>NP_690877 Length = 423 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLYITVRNA 9 ++Y+T+RNA Sbjct: 357 IMYMTLRNA 365>NP_057531 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T RNA Sbjct: 309 MMYLTTRNA 317>NP_000360 Length = 764 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYITVRN 8 +YITVRN Sbjct: 604 IYITVRN 610>XP_005268094 Length = 764 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYITVRN 8 +YITVRN Sbjct: 604 IYITVRN 610>XP_005249832 Length = 428 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T RNA Sbjct: 197 MMYLTTRNA 205>XP_006715803 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T RNA Sbjct: 309 MMYLTTRNA 317>XP_006715802 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T RNA Sbjct: 309 MMYLTTRNA 317>XP_006715801 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T RNA Sbjct: 309 MMYLTTRNA 317>NP_620687 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YITVRNA 9 YI+VRNA Sbjct: 785 YISVRNA 791>NP_852111 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYITVRN 8 +Y+TVRN Sbjct: 526 IYLTVRN 532>NP_000136 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYITVRN 8 +Y+TVRN Sbjct: 552 IYLTVRN 558>NP_008880 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLYI +RN Sbjct: 408 LLYILLRN 415>NP_001258963 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLYI +RN Sbjct: 419 LLYILLRN 426>NP_001120868 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLYI +RN Sbjct: 405 LLYILLRN 412>NP_001265305 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 338 MMYLTTKNA 346>NP_001265310 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 321 MMYLTTKNA 329>NP_001265299 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 366 MMYLTTKNA 374>NP_001265302 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 310 MMYLTTKNA 318>NP_001265301 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 345 MMYLTTKNA 353>NP_001265303 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 182 MMYLTTKNA 190>NP_001265304 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 310 MMYLTTKNA 318>NP_005365 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 321 MMYLTTKNA 329>NP_001265300 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 310 MMYLTTKNA 318>XP_006722914 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLYI +RN Sbjct: 381 LLYILLRN 388>XP_006721977 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 304 MMYLTTKNA 312>XP_006721976 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 315 MMYLTTKNA 323>XP_006721975 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLYITVRNA 9 ++Y+T +NA Sbjct: 332 MMYLTTKNA 340>NP_065386 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLYITVRNA 9 LL++++RNA Sbjct: 169 LLFMSLRNA 177>NP_060606 Length = 3477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYITVRNA 9 LY+ V+NA Sbjct: 3130 LYLAVKNA 3137>NP_001193775 Length = 1892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYITVRNA 9 LY+ V+NA Sbjct: 1545 LYLAVKNA 1552>NP_001136018 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YITVRNA 9 ++TVRNA Sbjct: 917 HVTVRNA 923>NP_361013 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YITVRNA 9 ++TVRNA Sbjct: 917 HVTVRNA 923>NP_002842 Length = 2315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LLYITVRN 8 L Y TVRN Sbjct: 1862 LAYYTVRN 1869>NP_001193767 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LLYITVRN 8 L Y TVRN Sbjct: 1002 LAYYTVRN 1009>XP_005268986 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLYITVRNA 9 LL++++RNA Sbjct: 169 LLFMSLRNA 177>XP_006716139 Length = 1869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LLYITVRN 8 L Y TVRN Sbjct: 1416 LAYYTVRN 1423>XP_005250576 Length = 2308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LLYITVRN 8 L Y TVRN Sbjct: 1855 LAYYTVRN 1862>NP_001193768 Length = 1448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LLYITVRN 8 L Y TVRN Sbjct: 995 LAYYTVRN 1002>NP_001128302 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535>NP_060121 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535>NP_004987 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 644 ITVRNA 649>NP_001128303 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535>NP_001128304 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535>NP_071431 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 +LY ++RN Sbjct: 94 ILYFSIRN 101>NP_653259 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLY+ +RN Sbjct: 1504 LLYLLMRN 1511>XP_005262426 Length = 2055 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLY+ +RN Sbjct: 1486 LLYLLMRN 1493>XP_005262425 Length = 2086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLYITVRN 8 LLY+ +RN Sbjct: 1517 LLYLLMRN 1524>XP_006720948 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 514 ITVRNA 519>XP_006720947 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255386 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255385 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 598 ITVRNA 603>XP_005255384 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITVRNA 9 ITVRNA Sbjct: 602 ITVRNA 607>XP_005267096 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535>XP_006715570 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYITVR 7 LY+TVR Sbjct: 530 LYVTVR 535Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.145 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 372,509 Number of extensions: 584 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |