Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 665 NP_000242 19 665 XP_005264389 19 665 NP_060595 17 4312 NP_001011722 17 4312 NP_001137310 17 4312 NP_808218 17 4312 NP_001271439 17 4312 NP_001271438 17 4312 NP_058132 17 4312 NP_001027581 17 4312 XP_006721567 17 4312 XP_006719497 17 4312 XP_006710797 17 4312 XP_005245986 17 4312 XP_005245985 17 4312 XP_005245984 17 4312 XP_005245983 17 4312 XP_006710796 17 4312 XP_006710795 17 4312 XP_005245982 17 4312 XP_005245981 17 4312 XP_006710794 17 4312 XP_006710793 17 4312 XP_006710792 17 4312 XP_006710791 17 4312 XP_006710790 17 4312 XP_005245980 17 4312 NP_002525 17 4312 NP_003310 16 5631 NP_001165882 16 5631 NP_597676 16 5631 NP_001165883 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_620409 16 5631 NP_000631 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 XP_006710999 16 5631 XP_006710998 16 5631 NP_001254479 16 5631 NP_597681 16 5631 XP_006723231 16 7355 XP_005258877 16 7355 XP_005258876 16 7355 NP_054756 16 7355 NP_073740 15 9605 NP_001180268 15 9605 NP_001274427 15 9605 NP_996996 15 9605 NP_060341 15 9605 NP_001243391 15 9605 NP_001243389 15 9605 NP_001243392 15 9605 NP_001243385 15 9605 XP_005244820 15 9605 XP_006710778 15 9605>NP_001245210 Length = 868 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 LL VFVTPL Sbjct: 366 LLAVFVTPL 374>NP_000242 Length = 934 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 LL VFVTPL Sbjct: 432 LLAVFVTPL 440>XP_005264389 Length = 921 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 LL VFVTPL Sbjct: 432 LLAVFVTPL 440>NP_060595 Length = 1279 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 732 MVVFITP 738>NP_001011722 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 693 MVVFITP 699>NP_001137310 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 +++FVTPL Sbjct: 15 VILFVTPL 22>NP_808218 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 +++FVTPL Sbjct: 15 VILFVTPL 22>NP_001271439 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 +++FVTPL Sbjct: 15 VILFVTPL 22>NP_001271438 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 +++FVTPL Sbjct: 15 VILFVTPL 22>NP_058132 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 LVVF++PL Sbjct: 78 LVVFLSPL 85>NP_001027581 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 LVVF++PL Sbjct: 78 LVVFLSPL 85>XP_006721567 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 +++FVTPL Sbjct: 15 VILFVTPL 22>XP_006719497 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 LVVF++PL Sbjct: 78 LVVFLSPL 85>XP_006710797 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 493 MVVFITP 499>XP_005245986 Length = 1052 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 505 MVVFITP 511>XP_005245985 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 507 MVVFITP 513>XP_005245984 Length = 1057 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 510 MVVFITP 516>XP_005245983 Length = 1235 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 688 MVVFITP 694>XP_006710796 Length = 1236 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 689 MVVFITP 695>XP_006710795 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 692 MVVFITP 698>XP_005245982 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 693 MVVFITP 699>XP_005245981 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 694 MVVFITP 700>XP_006710794 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710793 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710792 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710791 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 697 MVVFITP 703>XP_006710790 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 697 MVVFITP 703>XP_005245980 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVVFVTP 8 +VVF+TP Sbjct: 697 MVVFITP 703>NP_002525 Length = 364 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 LVVF++PL Sbjct: 78 LVVFLSPL 85>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 5341 LPLIFITPL 5349>NP_001165882 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 L+VF+TP+ Sbjct: 119 LLVFLTPI 126>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 5466 LPLIFITPL 5474>NP_001165883 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 L+VF+TP+ Sbjct: 121 LLVFLTPI 128>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 12765 LPLIFITPL 12773>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 11838 LPLIFITPL 11846>NP_620409 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 L+VF+TP+ Sbjct: 121 LLVFLTPI 128>NP_000631 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 +LV+FVT L Sbjct: 353 ILVIFVTGL 361>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 1078 LPLIFITPL 1086>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 2437 LPLIFITPL 2445>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 12393 LPLIFITPL 12401>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 13899 LPLIFITPL 13907>XP_006710999 Length = 463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 L+VF+TP+ Sbjct: 60 LLVFLTPI 67>XP_006710998 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVVFVTPL 9 L+VF+TP+ Sbjct: 121 LLVFLTPI 128>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 14406 LPLIFITPL 14414>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLVVFVTPL 9 L ++F+TPL Sbjct: 5533 LPLIFITPL 5541>XP_006723231 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLVVFVT 7 LL++FVT Sbjct: 622 LLIIFVT 628>XP_005258877 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLVVFVT 7 LL++FVT Sbjct: 622 LLIIFVT 628>XP_005258876 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLVVFVT 7 LL++FVT Sbjct: 704 LLIIFVT 710>NP_054756 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLVVFVT 7 LL++FVT Sbjct: 622 LLIIFVT 628>NP_073740 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLVVFVTPL 9 LLV+ TPL Sbjct: 17 LLVLLFTPL 25>NP_001180268 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLVVFVTPL 9 LLV+ TPL Sbjct: 17 LLVLLFTPL 25>NP_001274427 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVFVTPL 9 +VF++PL Sbjct: 453 IVFISPL 459>NP_996996 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVFVTPL 9 +VF++PL Sbjct: 469 IVFISPL 475>NP_060341 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 319 MVVFATP 325>NP_001243391 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 221 MVVFATP 227>NP_001243389 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 290 MVVFATP 296>NP_001243392 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 218 MVVFATP 224>NP_001243385 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 325 MVVFATP 331>XP_005244820 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 221 MVVFATP 227>XP_006710778 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVVFVTP 8 +VVF TP Sbjct: 319 MVVFATP 325Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.161 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,369 Number of extensions: 674 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |