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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_570711                                                              18    1135
NP_570712                                                              18    1135
NP_570714                                                              18    1135
NP_570713                                                              18    1135
NP_570716                                                              18    1135
NP_000235                                                              18    1135
NP_570715                                                              18    1135
XP_006718620                                                           18    1135
XP_005274059                                                           18    1135
XP_005274060                                                           18    1135
XP_005274058                                                           18    1135
XP_005256447                                                           16    7355
NP_005043                                                              16    7355
NP_001274141                                                           15    9605
NP_065944                                                              15    9605
NP_004789                                                              15    9605
NP_008985                                                              15    9605
NP_065867                                                              15    9605
NP_001116291                                                           15    9605
XP_005271926                                                           15    9605
XP_006714589                                                           15    9605
XP_005271925                                                           15    9605
XP_005246008                                                           15    9605
XP_005246007                                                           15    9605

>NP_570711
          Length = 610

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 564 LLVATKIN 571



>NP_570712
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>NP_570714
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>NP_570713
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>NP_570716
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>NP_000235
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>NP_570715
          Length = 615

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 569 LLVATKIN 576



>XP_006718620
          Length = 610

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 564 LLVATKIN 571



>XP_005274059
          Length = 610

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 564 LLVATKIN 571



>XP_005274060
          Length = 610

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 564 LLVATKIN 571



>XP_005274058
          Length = 610

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LLVATKIN 8
           LLVATKIN
Sbjct: 564 LLVATKIN 571



>XP_005256447
          Length = 170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LLVATKINL 9
           LLV TK++L
Sbjct: 111 LLVGTKLDL 119



>NP_005043
          Length = 192

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LLVATKINL 9
           LLV TK++L
Sbjct: 111 LLVGTKLDL 119



>NP_001274141
          Length = 929

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 160 ATKINL 165



>NP_065944
          Length = 1701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VATKIN 8
           VATKIN
Sbjct: 901 VATKIN 906



>NP_004789
          Length = 747

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 265 ATKINL 270



>NP_008985
          Length = 699

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 270 ATKINL 275



>NP_065867
          Length = 1029

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 260 ATKINL 265



>NP_001116291
          Length = 1028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 260 ATKINL 265



>XP_005271926
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 270 ATKINL 275



>XP_006714589
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 270 ATKINL 275



>XP_005271925
          Length = 726

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 270 ATKINL 275



>XP_005246008
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 260 ATKINL 265



>XP_005246007
          Length = 985

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ATKINL 9
           ATKINL
Sbjct: 260 ATKINL 265



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.328    0.142    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 235,284
Number of extensions: 263
Number of successful extensions: 24
Number of sequences better than 10000.0: 24
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 24
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)