Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_054742 16 5631 NP_004648 16 5631 NP_001240775 16 7355 NP_001491 16 7355 XP_006715129 16 7355 NP_001034484 15 9605 NP_612350 15 9605 NP_001180382 15 9605 NP_001180460 15 9605 NP_005133 15 9605 NP_004718 15 9605 XP_005254838 15 9605 XP_006720832 15 9605 XP_006720831 15 9605 XP_005254837 15 9605 XP_006720830 15 9605 XP_006720829 15 9605 XP_005254836 15 9605 XP_006720828 15 9605 XP_006720827 15 9605 XP_005254835 15 9605 XP_006719743 15 9605 XP_006719742 15 9605 XP_006719741 15 9605 XP_005254043 15 9605 XP_005254042 15 9605 XP_005273967 15 9605 XP_006716866 15 9605 XP_006716865 15 9605 XP_006716864 15 9605 XP_005251556 15 9605 XP_006716863 15 9605 XP_006716862 15 9605 XP_006716861 15 9605 XP_006716860 15 9605 XP_006716859 15 9605 XP_006716858 15 9605 XP_006715232 15 9605 XP_005249381 15 9605 XP_005249380 15 9605 XP_005249379 15 9605 XP_005249377 15 9605 XP_005249376 15 9605 XP_005249375 15 9605 XP_005249374 15 9605 XP_005249373 15 9605 XP_005249372 15 9605 XP_005249371 15 9605 XP_005249370 15 9605 XP_005249369 15 9605 XP_005249368 15 9605 XP_005249367 15 9605 NP_008955 15 9605>NP_054742 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TYQASTS 9 TY+ASTS Sbjct: 125 TYKASTS 131>NP_004648 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLTYQASTS 9 L YQASTS Sbjct: 100 LSKYQASTS 108>NP_001240775 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YQASTS 9 YQASTS Sbjct: 121 YQASTS 126>NP_001491 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YQASTS 9 YQASTS Sbjct: 151 YQASTS 156>XP_006715129 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YQASTS 9 YQASTS Sbjct: 151 YQASTS 156>NP_001034484 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 256 TYQHSTS 262>NP_612350 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 235 LTFPASTS 242>NP_001180382 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 292 LTFPASTS 299>NP_001180460 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 327 LTFPASTS 334>NP_005133 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLTYQASTS 9 LLTYQ +S Sbjct: 74 LLTYQLMSS 82>NP_004718 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_005254838 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720832 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720831 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_005254837 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720830 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720829 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_005254836 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720828 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006720827 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_005254835 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTYQASTS 9 LTY STS Sbjct: 151 LTYYTSTS 158>XP_006719743 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 235 LTFPASTS 242>XP_006719742 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 326 LTFPASTS 333>XP_006719741 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 354 LTFPASTS 361>XP_005254043 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 361 LTFPASTS 368>XP_005254042 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTYQASTS 9 LT+ ASTS Sbjct: 384 LTFPASTS 391>XP_005273967 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLTYQASTS 9 LLTYQ +S Sbjct: 49 LLTYQLMSS 57>XP_006716866 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 147 TYQHSTS 153>XP_006716865 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 191 TYQHSTS 197>XP_006716864 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 205 TYQHSTS 211>XP_005251556 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 248 TYQHSTS 254>XP_006716863 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 295 TYQHSTS 301>XP_006716862 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 314 TYQHSTS 320>XP_006716861 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 328 TYQHSTS 334>XP_006716860 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 328 TYQHSTS 334>XP_006716859 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 328 TYQHSTS 334>XP_006716858 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TYQASTS 9 TYQ STS Sbjct: 328 TYQHSTS 334>XP_006715232 Length = 7498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1813 ILTYQVQT 1820>XP_005249381 Length = 7281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1487 ILTYQVQT 1494>XP_005249380 Length = 7607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1813 ILTYQVQT 1820>XP_005249379 Length = 7633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1839 ILTYQVQT 1846>XP_005249377 Length = 7640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1846 ILTYQVQT 1853>XP_005249376 Length = 7647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1853 ILTYQVQT 1860>XP_005249375 Length = 7680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1886 ILTYQVQT 1893>XP_005249374 Length = 7709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249373 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1929 ILTYQVQT 1936>XP_005249372 Length = 7785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 1991 ILTYQVQT 1998>XP_005249371 Length = 7788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249370 Length = 7794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249369 Length = 7797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2003 ILTYQVQT 2010>XP_005249368 Length = 7812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249367 Length = 7818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLTYQAST 8 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>NP_008955 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLTYQAS 7 LLTY AS Sbjct: 118 LLTYMAS 124Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.110 0.261 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 356,638 Number of extensions: 361 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |