Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 YP_003024032 17 2528 NP_064593 17 3301 XP_005265293 17 3301 NP_071800 17 3301 NP_002323 17 4312 NP_060626 16 5631 NP_056193 16 5631 NP_001243040 16 5631 NP_001243035 16 5631 NP_004249 16 5631 NP_001243038 16 5631 NP_065164 16 7355 NP_783864 16 7355 NP_008853 16 7355 NP_001035232 16 7355 NP_066287 16 7355 NP_001075145 16 7355 NP_001075146 16 7355 NP_001035233 16 7355 NP_001138760 16 7355 NP_647480 16 7355 NP_001121696 16 7355 NP_001017395 16 7355 XP_005262701 16 7355 XP_006713617 16 7355 XP_006713616 16 7355 XP_006713615 16 7355 XP_006713614 16 7355 XP_006713613 16 7355 XP_006713612 16 7355 XP_006713611 16 7355 XP_006713610 16 7355 XP_006713609 16 7355 XP_006713608 16 7355 XP_006713607 16 7355 XP_006713606 16 7355 XP_006713605 16 7355 XP_006712742 16 7355 XP_005246812 16 7355 XP_005246811 16 7355 XP_005246810 16 7355 XP_005246808 16 7355 XP_005246807 16 7355 NP_056506 15 9605 NP_001273113 15 9605 NP_055470 15 9605 NP_001154 15 9605 NP_872363 15 9605 XP_005271570 15 9605 XP_005271569 15 9605 XP_006718878 15 9605 XP_005271568 15 9605 XP_005252025 15 9605 XP_005252024 15 9605 XP_006717156 15 9605 XP_006711720 15 9605 NP_115679 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTNTMDMF 9 LLTNTMD+F Sbjct: 3997 LLTNTMDVF 4005>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTNTMDMF 9 LLTNTMD+F Sbjct: 3966 LLTNTMDVF 3974>YP_003024032 Length = 261 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTNTMDMF 9 LLTNT+ M+ Sbjct: 47 LLTNTLTMY 55>NP_064593 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 LLTNT D+ Sbjct: 316 LLTNTFDL 323>XP_005265293 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 LLTNT D+ Sbjct: 316 LLTNTFDL 323>NP_071800 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 LLTNT D+ Sbjct: 279 LLTNTFDL 286>NP_002323 Length = 4544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLTNTMDMF 9 L +N MDMF Sbjct: 2091 LSSNNMDMF 2099>NP_060626 Length = 4363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLTNTMD 7 LLTNT D Sbjct: 740 LLTNTQD 746>NP_056193 Length = 4388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLTNTMD 7 LLTNT D Sbjct: 740 LLTNTQD 746>NP_001243040 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTNT D+ Sbjct: 491 MLTNTFDL 498>NP_001243035 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_004249 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_001243038 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_065164 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLTNTMDMF 9 ++ NT+DM+ Sbjct: 429 IIMNTIDMY 437>NP_783864 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NTMDMF 9 NTMD+F Sbjct: 312 NTMDIF 317>NP_008853 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 711 ILTNTME 717>NP_001035232 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_066287 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_001075145 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 662 ILTNTME 668>NP_001075146 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 662 ILTNTME 668>NP_001035233 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_001138760 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTNTMDMF 9 LT+T++MF Sbjct: 166 LTSTLNMF 173>NP_647480 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTNTMDMF 9 LT+T++MF Sbjct: 166 LTSTLNMF 173>NP_001121696 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 335 TNTLDM 340>NP_001017395 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_005262701 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NTMDMF 9 NTMD+F Sbjct: 312 NTMDIF 317>XP_006713617 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 259 TNTLDM 264>XP_006713616 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 266 TNTLDM 271>XP_006713615 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 276 TNTLDM 281>XP_006713614 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713613 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713612 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713611 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713610 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713609 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713608 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713607 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713606 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713605 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TNTMDM 8 TNT+DM Sbjct: 449 TNTLDM 454>XP_006712742 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 711 ILTNTME 717>XP_005246812 Length = 1754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 459 ILTNTME 465>XP_005246811 Length = 1995 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 700 ILTNTME 706>XP_005246810 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>XP_005246808 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>XP_005246807 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLTNTMD 7 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_056506 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TNTMDMF 9 TNT D+F Sbjct: 871 TNTEDLF 877>NP_001273113 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTN MD+ Sbjct: 246 ILTNPMDV 253>NP_055470 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTN MD+ Sbjct: 238 ILTNPMDV 245>NP_001154 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTNTMDMF 9 L NT DM+ Sbjct: 634 LLNTQDMY 641>NP_872363 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 NTMDMF 9 NT DMF Sbjct: 865 NTQDMF 870>XP_005271570 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 NTMDMF 9 NT DMF Sbjct: 828 NTQDMF 833>XP_005271569 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 NTMDMF 9 NT DMF Sbjct: 828 NTQDMF 833>XP_006718878 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 NTMDMF 9 NT DMF Sbjct: 865 NTQDMF 870>XP_005271568 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 NTMDMF 9 NT DMF Sbjct: 865 NTQDMF 870>XP_005252025 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTNTMDMF 9 L NT DM+ Sbjct: 623 LLNTQDMY 630>XP_005252024 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTNTMDMF 9 L NT DM+ Sbjct: 634 LLNTQDMY 641>XP_006717156 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTNTMDMF 9 L NT DM+ Sbjct: 634 LLNTQDMY 641>XP_006711720 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLTNTMDM 8 +LTN MD+ Sbjct: 246 ILTNPMDV 253>NP_115679 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTNTMD 7 LTNT+D Sbjct: 107 LTNTLD 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.139 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 378,444 Number of extensions: 622 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |