Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_005583 17 3301 NP_001159752 17 3301 NP_001159753 17 3301 XP_005252053 17 3301 XP_005252052 17 3301 XP_005252051 17 3301 NP_722517 17 4312 NP_060119 16 5631 NP_951058 16 5631 NP_001092007 16 5631 NP_689499 16 5631 NP_000224 16 5631 NP_000360 16 5631 XP_005268094 16 5631 XP_005266139 16 5631 XP_005266136 16 5631 XP_006717167 16 5631 XP_006717166 16 5631 XP_006717165 16 5631 XP_005264366 16 5631 XP_006712078 16 5631 NP_001240658 16 7355 NP_001240657 16 7355 NP_001240656 16 7355 NP_001240659 16 7355 NP_001240662 16 7355 NP_001240661 16 7355 NP_067647 16 7355 NP_055429 16 7355 XP_006712032 16 7355 NP_000825 15 9605 NP_001127880 15 9605 NP_000824 15 9605 NP_001127879 15 9605 NP_060109 15 9605 NP_001159530 15 9605 NP_001020750 15 9605 NP_001438 15 9605 NP_115605 15 9605 NP_570718 15 9605 NP_110435 15 9605 XP_006721644 15 9605 XP_005256863 15 9605 XP_006721643 15 9605 XP_005255325 15 9605 XP_005255324 15 9605 XP_006717822 15 9605 XP_006717821 15 9605 XP_005269749 15 9605 XP_006717820 15 9605 XP_006714824 15 9605 NP_065081 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 251 ILTIITLED 259>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 212 ILTIITLED 220>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 251 ILTIITLED 259>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 251 ILTIITLED 259>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 212 ILTIITLED 220>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 212 ILTIITLED 220>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 212 ILTIITLED 220>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 251 ILTIITLED 259>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 212 ILTIITLED 220>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 119 ILTIITLED 127>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 119 ILTIITLED 127>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 119 ILTIITLED 127>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 92 ILTIITLED 100>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 92 ILTIITLED 100>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 +LTIITLED Sbjct: 92 ILTIITLED 100>NP_005583 Length = 869 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>NP_001159752 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>NP_001159753 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>XP_005252053 Length = 861 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>XP_005252052 Length = 871 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>XP_005252051 Length = 879 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LLTIITLED 9 LLTI+++ED Sbjct: 83 LLTILSVED 91>NP_722517 Length = 369 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 L+ +IT+ED Sbjct: 123 LMNVITIED 131>NP_060119 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 +L I+TLED Sbjct: 563 VLGIVTLED 571>NP_951058 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 +L I+TLED Sbjct: 563 VLGIVTLED 571>NP_001092007 Length = 1342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 484 LLTLMKLED 492>NP_689499 Length = 1317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 459 LLTLMKLED 467>NP_000224 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 457 LTVITLE 463>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005266139 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 485 LLTLMKLED 493>XP_005266136 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 485 LLTLMKLED 493>XP_006717167 Length = 1309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 451 LLTLMKLED 459>XP_006717166 Length = 1316 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 458 LLTLMKLED 466>XP_006717165 Length = 1343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 LLT++ LED Sbjct: 485 LLTLMKLED 493>XP_005264366 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 138 LTVITLE 144>XP_006712078 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 147 LTVITLE 153>NP_001240658 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 454 LLTFLTLE 461>NP_001240657 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 469 LLTFLTLE 476>NP_001240656 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 529 LLTFLTLE 536>NP_001240659 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 371 LLTFLTLE 378>NP_001240662 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 346 LLTFLTLE 353>NP_001240661 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 370 LLTFLTLE 377>NP_067647 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 502 LLTFLTLE 509>NP_055429 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 L+T ++LED Sbjct: 1322 LITFLSLED 1330>XP_006712032 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 L+T ++LED Sbjct: 480 LITFLSLED 488>NP_000825 Length = 1484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 406 LSIVTLEE 413>NP_001127880 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 406 LSIVTLEE 413>NP_000824 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 406 LSIVTLEE 413>NP_001127879 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 406 LSIVTLEE 413>NP_060109 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 +LT++ L+D Sbjct: 1236 ILTVLALDD 1244>NP_001159530 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 488 LLTYLTLE 495>NP_001020750 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLED 9 TI++LED Sbjct: 132 TIVSLED 138>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IITLED 9 IITLED Sbjct: 912 IITLED 917>NP_115605 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLTIITLED 9 LLT I LED Sbjct: 508 LLTQIDLED 516>NP_570718 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLTIITLE 8 LLT +TLE Sbjct: 512 LLTYLTLE 519>NP_110435 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLED 9 TI++LED Sbjct: 132 TIVSLED 138>XP_006721644 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLED 9 TI++LED Sbjct: 132 TIVSLED 138>XP_005256863 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLED 9 TI++LED Sbjct: 132 TIVSLED 138>XP_006721643 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLED 9 TI++LED Sbjct: 132 TIVSLED 138>XP_005255325 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 458 LSIVTLEE 465>XP_005255324 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLED 9 L+I+TLE+ Sbjct: 458 LSIVTLEE 465>XP_006717822 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 ++ I+TLED Sbjct: 547 VMGIVTLED 555>XP_006717821 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 ++ I+TLED Sbjct: 547 VMGIVTLED 555>XP_005269749 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 ++ I+TLED Sbjct: 547 VMGIVTLED 555>XP_006717820 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 ++ I+TLED Sbjct: 547 VMGIVTLED 555>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IITLED 9 IITLED Sbjct: 912 IITLED 917>NP_065081 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLTIITLED 9 ++ I+TLED Sbjct: 547 VMGIVTLED 555Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.150 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 468,546 Number of extensions: 1092 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |