Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_612449 18 1135 NP_733751 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_001271215 17 3301 NP_001271214 17 3301 NP_066973 16 5631 NP_001171545 16 5631 XP_005268816 16 5631 XP_005268815 16 5631 XP_005268814 16 5631 XP_005268813 16 5631 XP_005268812 16 5631 XP_005268811 16 5631 NP_001005490 16 7355 NP_116277 16 7355 XP_006717372 16 7355 XP_006717371 16 7355 XP_005271185 16 7355 XP_005271183 16 7355 XP_005271182 16 7355 NP_112174 16 7355 NP_073611 16 7355 NP_001124456 15 9605 NP_001124459 15 9605 NP_001124455 15 9605 NP_001124450 15 9605 NP_001124449 15 9605 NP_001124453 15 9605 NP_004235 15 9605 NP_001252516 15 9605 NP_981961 15 9605 NP_001239312 15 9605 NP_001278233 15 9605 NP_001263629 15 9605 NP_612202 15 9605 NP_008944 15 9605 NP_056121 15 9605 NP_001073865 15 9605 NP_777593 15 9605 NP_955452 15 9605 NP_001074003 15 9605 XP_005276595 15 9605 XP_006722199 15 9605 XP_005257785 15 9605 XP_005254452 15 9605 XP_005254451 15 9605 XP_005253586 15 9605 XP_005253585 15 9605 XP_006717910 15 9605 XP_005269884 15 9605 XP_006717909 15 9605 XP_005269883 15 9605 XP_006717905 15 9605 XP_006717902 15 9605 XP_006717901 15 9605 XP_006717900 15 9605 XP_005250818 15 9605 XP_005250817 15 9605 XP_006713543 15 9605 XP_005264642 15 9605 XP_005264641 15 9605 XP_005270747 15 9605 XP_006710574 15 9605 XP_005270746 15 9605 NP_001129475 15 9605 NP_115510 15 9605 YP_003024032 15 9605>NP_612449 Length = 673 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSSSLAPT 9 LSSSLAPT Sbjct: 371 LSSSLAPT 378>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1411 LLSSSSAPT 1419>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1411 LLSSSSAPT 1419>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLSSS APT Sbjct: 1412 LLSSSSAPT 1420>NP_001271215 Length = 939 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSLAPT Sbjct: 36 SSSLAPT 42>NP_001271214 Length = 1006 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSLAPT Sbjct: 103 SSSLAPT 109>NP_066973 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 350 LVSSSFSPT 358>NP_001171545 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 350 LVSSSFSPT 358>XP_005268816 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 351 LVSSSFSPT 359>XP_005268815 Length = 1077 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 351 LVSSSFSPT 359>XP_005268814 Length = 1102 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 376 LVSSSFSPT 384>XP_005268813 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 403 LVSSSFSPT 411>XP_005268812 Length = 1128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 402 LVSSSFSPT 410>XP_005268811 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L+SSS +PT Sbjct: 403 LVSSSFSPT 411>NP_001005490 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSSSLAP 8 LLS+S+AP Sbjct: 274 LLSTSVAP 281>NP_116277 Length = 1860 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSSSLAPT 9 LSSS APT Sbjct: 487 LSSSPAPT 494>XP_006717372 Length = 1842 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSSSLAPT 9 LSSS APT Sbjct: 487 LSSSPAPT 494>XP_006717371 Length = 1842 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSSSLAPT 9 LSSS APT Sbjct: 487 LSSSPAPT 494>XP_005271185 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSSSLAP 8 +LSS+LAP Sbjct: 360 VLSSTLAP 367>XP_005271183 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSSSLAP 8 +LSS+LAP Sbjct: 360 VLSSTLAP 367>XP_005271182 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSSSLAP 8 +LSS+LAP Sbjct: 360 VLSSTLAP 367>NP_112174 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSL+PT Sbjct: 317 SSSLSPT 323>NP_073611 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSSSLAP 8 +LSS+LAP Sbjct: 360 VLSSTLAP 367>NP_001124456 Length = 2088 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1463 SSLAPT 1468>NP_001124459 Length = 2119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1494 SSLAPT 1499>NP_001124455 Length = 2102 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1477 SSLAPT 1482>NP_001124450 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1476 SSLAPT 1481>NP_001124449 Length = 2087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1462 SSLAPT 1467>NP_001124453 Length = 2118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1493 SSLAPT 1498>NP_004235 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSSL PT Sbjct: 695 SSSLGPT 701>NP_001252516 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLSSS PT Sbjct: 77 LLSSSNPPT 85>NP_981961 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSSL PT Sbjct: 695 SSSLGPT 701>NP_001239312 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLSSS PT Sbjct: 43 LLSSSNPPT 51>NP_001278233 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLSSS PT Sbjct: 13 LLSSSNLPT 21>NP_001263629 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLS +L PT Sbjct: 311 LLSKALLPT 319>NP_612202 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLS +L PT Sbjct: 311 LLSKALLPT 319>NP_008944 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSS APT Sbjct: 246 SSSFAPT 252>NP_056121 Length = 2620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 +LSS L PT Sbjct: 1180 VLSSKLMPT 1188>NP_001073865 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 LLS+S +PT Sbjct: 122 LLSASSSPT 130>NP_777593 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 182 SSLAPT 187>NP_955452 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSSSLAP 8 LSSSL+P Sbjct: 619 LSSSLSP 625>NP_001074003 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSLAP+ Sbjct: 157 SSSLAPS 163>XP_005276595 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 LLS+S PT Sbjct: 84 LLSASTVPT 92>XP_006722199 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLSSSLAP 8 LLS S+AP Sbjct: 109 LLSMSMAP 116>XP_005257785 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLSSSLAP 8 LLS S+AP Sbjct: 1355 LLSMSMAP 1362>XP_005254452 Length = 2188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSLAP+ Sbjct: 157 SSSLAPS 163>XP_005254451 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSSLAPT 9 SSSLAP+ Sbjct: 157 SSSLAPS 163>XP_005253586 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSSL PT Sbjct: 695 SSSLGPT 701>XP_005253585 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSSL PT Sbjct: 728 SSSLGPT 734>XP_006717910 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 177 LRTSSLSPT 185>XP_005269884 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 177 LRTSSLSPT 185>XP_006717909 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 205 LRTSSLSPT 213>XP_005269883 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 205 LRTSSLSPT 213>XP_006717905 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 407 LRTSSLSPT 415>XP_006717902 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 444 LRTSSLSPT 452>XP_006717901 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 445 LRTSSLSPT 453>XP_006717900 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSSSLAPT 9 L +SSL+PT Sbjct: 461 LRTSSLSPT 469>XP_005250818 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSS APT Sbjct: 245 SSSFAPT 251>XP_005250817 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSSLAPT 9 SSS APT Sbjct: 246 SSSFAPT 252>XP_006713543 Length = 2591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSSSLAP 8 LSSSL+P Sbjct: 620 LSSSLSP 626>XP_005264642 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1507 SSLAPT 1512>XP_005264641 Length = 2133 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 1508 SSLAPT 1513>XP_005270747 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 +LSS L PT Sbjct: 585 VLSSKLMPT 593>XP_006710574 Length = 2445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 +LSS L PT Sbjct: 1005 VLSSKLMPT 1013>XP_005270746 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSSSLAPT 9 +LSS L PT Sbjct: 1005 VLSSKLMPT 1013>NP_001129475 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 344 SSLAPT 349>NP_115510 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLSSSLAP 8 LLS S+AP Sbjct: 1189 LLSMSMAP 1196>YP_003024032 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLAPT 9 SSLAPT Sbjct: 104 SSLAPT 109Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.114 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,841 Number of extensions: 1449 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |