Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_008941 16 5631 NP_001278405 16 5631 XP_006725362 16 5631 XP_006721713 16 5631 NP_004392 16 7355 NP_075559 16 7355 NP_998731 16 7355 XP_005268213 16 7355 NP_694945 15 9605 NP_001136087 15 9605 NP_006729 15 9605 NP_001257475 15 9605 NP_009131 15 9605 NP_001136086 15 9605 NP_005344 15 9605 XP_005254913 15 9605 XP_005254912 15 9605 XP_005254911 15 9605 XP_005254910 15 9605 XP_005254909 15 9605 XP_005254908 15 9605 XP_005254907 15 9605 XP_005254906 15 9605 XP_005254905 15 9605 XP_005254904 15 9605 XP_005254903 15 9605 XP_005254902 15 9605 XP_005254901 15 9605 XP_005254900 15 9605 XP_005254899 15 9605 XP_005254898 15 9605 XP_005254897 15 9605 XP_006720441 15 9605 XP_006720440 15 9605 XP_006720439 15 9605 XP_005254896 15 9605 XP_005266168 15 9605 XP_005264285 15 9605 XP_006712034 15 9605 XP_005264284 15 9605 XP_005264283 15 9605 XP_005264282 15 9605 XP_006711261 15 9605 NP_001136088 15 9605 NP_056067 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLSRQKESM 9 LLSRQKE+M Sbjct: 1975 LLSRQKEAM 1983>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLSRQKESM 9 LLSRQKE+M Sbjct: 1975 LLSRQKEAM 1983>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLSRQKESM 9 LLSRQKE+M Sbjct: 1928 LLSRQKEAM 1936>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLSRQKESM 9 LLSRQKE+M Sbjct: 2007 LLSRQKEAM 2015>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLSRQKESM 9 LLSRQKE+M Sbjct: 2007 LLSRQKEAM 2015>NP_008941 Length = 599 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 LLS+QK+ M Sbjct: 548 LLSKQKKKM 556>NP_001278405 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 LLS+QK+ M Sbjct: 440 LLSKQKKKM 448>XP_006725362 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 LLS+QK+ M Sbjct: 362 LLSKQKKKM 370>XP_006721713 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 LLS+QK+ M Sbjct: 362 LLSKQKKKM 370>NP_004392 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSRQKES 8 LLS+Q+ES Sbjct: 205 LLSKQEES 212>NP_075559 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSRQKES 8 LLSRQK++ Sbjct: 303 LLSRQKKA 310>NP_998731 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSRQKES 8 LLS+Q+ES Sbjct: 205 LLSKQEES 212>XP_005268213 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSRQKES 8 LLSRQ++S Sbjct: 162 LLSRQQDS 169>NP_694945 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSR+KE Sbjct: 630 LLSRRKE 636>NP_001136087 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 775 LLSRQEE 781>NP_006729 Length = 2817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2060 ILERKKESL 2068>NP_001257475 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 677 ILERKKESL 685>NP_009131 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2056 ILERKKESL 2064>NP_001136086 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 775 LLSRQEE 781>NP_005344 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLSRQKES 8 ++SRQ+ES Sbjct: 924 MISRQEES 931>XP_005254913 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 677 ILERKKESL 685>XP_005254912 Length = 1442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 678 ILERKKESL 686>XP_005254911 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 709 ILERKKESL 717>XP_005254910 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 759 ILERKKESL 767>XP_005254909 Length = 1536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 772 ILERKKESL 780>XP_005254908 Length = 1536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 772 ILERKKESL 780>XP_005254907 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 1826 ILERKKESL 1834>XP_005254906 Length = 2675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 1911 ILERKKESL 1919>XP_005254905 Length = 2793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2036 ILERKKESL 2044>XP_005254904 Length = 2802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2038 ILERKKESL 2046>XP_005254903 Length = 2820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2056 ILERKKESL 2064>XP_005254902 Length = 2835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2078 ILERKKESL 2086>XP_005254901 Length = 2842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2078 ILERKKESL 2086>XP_005254900 Length = 2843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2079 ILERKKESL 2087>XP_005254899 Length = 2861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2097 ILERKKESL 2105>XP_005254898 Length = 2874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2117 ILERKKESL 2125>XP_005254897 Length = 2876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2119 ILERKKESL 2127>XP_006720441 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2117 ILERKKESL 2125>XP_006720440 Length = 2882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2119 ILERKKESL 2127>XP_006720439 Length = 2882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2118 ILERKKESL 2126>XP_005254896 Length = 2883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 +L R+KES+ Sbjct: 2119 ILERKKESL 2127>XP_005266168 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSRQKE 7 LSRQKE Sbjct: 914 LSRQKE 919>XP_005264285 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 528 LLSRQEE 534>XP_006712034 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 810 LLSRQEE 816>XP_005264284 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 775 LLSRQEE 781>XP_005264283 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 810 LLSRQEE 816>XP_005264282 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 810 LLSRQEE 816>XP_006711261 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSRQKESM 9 LLSR+ ES+ Sbjct: 9 LLSRRPESL 17>NP_001136088 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 775 LLSRQEE 781>NP_056067 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLSRQKE 7 LLSRQ+E Sbjct: 810 LLSRQEE 816Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.118 0.262 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,595 Number of extensions: 603 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |