Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_000095 17 4312 NP_848563 17 4312 NP_653081 17 4312 NP_055650 17 4312 NP_060500 17 4312 NP_001229437 17 4312 NP_542164 17 4312 NP_001265578 17 4312 XP_006722445 17 4312 XP_006722443 17 4312 NP_862829 16 5631 NP_848552 16 5631 XP_005260332 16 5631 XP_005260331 16 5631 XP_005260330 16 5631 XP_006723761 16 5631 XP_005260329 16 5631 XP_006723255 16 5631 XP_006723254 16 5631 XP_006723253 16 5631 NP_005480 16 7355 NP_001239263 16 7355 NP_001136004 16 7355 NP_001136005 16 7355 NP_733745 16 7355 NP_001136003 16 7355 NP_001136006 16 7355 NP_001164638 16 7355 NP_055670 16 7355 XP_005251694 16 7355 XP_005251696 16 7355 NP_659440 15 9605 NP_001177369 15 9605 NP_006302 15 9605 NP_079368 15 9605 NP_001013725 15 9605 NP_114147 15 9605 XP_005260150 15 9605 XP_005256932 15 9605 XP_006721667 15 9605 XP_005256931 15 9605 XP_005256930 15 9605 XP_006721666 15 9605 XP_005256929 15 9605 XP_005256928 15 9605 XP_006721665 15 9605 XP_005256925 15 9605 XP_005256924 15 9605 XP_006721664 15 9605 XP_005256923 15 9605 XP_005254450 15 9605 XP_005254449 15 9605 XP_006718399 15 9605 XP_006718398 15 9605 XP_006718397 15 9605 XP_006718396 15 9605 XP_006718395 15 9605 XP_006718394 15 9605 XP_006718393 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 LL HNEAAR Sbjct: 365 LLPHNEAAR 373>NP_000095 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LLSHNE 6 LLSHNE Sbjct: 224 LLSHNE 229>NP_848563 Length = 747 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L H+EAAR Sbjct: 38 VLRHSEAAR 46>NP_653081 Length = 480 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 223 LLKHNEA 229>NP_055650 Length = 468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 211 LLKHNEA 217>NP_060500 Length = 437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 183 LLEHNEA 189>NP_001229437 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 314 LLEHNEA 320>NP_542164 Length = 950 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 696 LLEHNEA 702>NP_001265578 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 131 LLKHNEA 137>XP_006722445 Length = 905 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 651 LLEHNEA 657>XP_006722443 Length = 925 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LL HNEA Sbjct: 671 LLEHNEA 677>NP_862829 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSHNEAAR 9 ++H+EAAR Sbjct: 42 IAHSEAAR 49>NP_848552 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_005260332 Length = 1256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_005260331 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_005260330 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_006723761 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_005260329 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLSHNEA 7 L+SHN+A Sbjct: 411 LISHNQA 417>XP_006723255 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSHNEAAR 9 ++H+EAAR Sbjct: 42 IAHSEAAR 49>XP_006723254 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSHNEAAR 9 ++H+EAAR Sbjct: 42 IAHSEAAR 49>XP_006723253 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSHNEAAR 9 ++H+EAAR Sbjct: 42 IAHSEAAR 49>NP_005480 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 619 VLAHLEAAR 627>NP_001239263 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 708 VLAHLEAAR 716>NP_001136004 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 422 VLAHLEAAR 430>NP_001136005 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 618 VLAHLEAAR 626>NP_733745 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 776 VLAHLEAAR 784>NP_001136003 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 422 VLAHLEAAR 430>NP_001136006 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 616 VLAHLEAAR 624>NP_001164638 Length = 1241 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LLSHNEA 7 LLSH EA Sbjct: 1181 LLSHQEA 1187>NP_055670 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSHNEAA 8 LSH EAA Sbjct: 375 LSHGEAA 381>XP_005251694 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 738 VLAHLEAAR 746>XP_005251696 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLSHNEAAR 9 +L+H EAAR Sbjct: 422 VLAHLEAAR 430>NP_659440 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SHNEAAR 9 SH EAAR Sbjct: 466 SHAEAAR 472>NP_001177369 Length = 2337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1082 LTSHNQAS 1089>NP_006302 Length = 2440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1066 LTSHNQAS 1073>NP_079368 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>NP_001013725 Length = 1649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLSHNEAA 8 + HNEAA Sbjct: 1095 IYEHNEAA 1102>NP_114147 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSHNEA 7 LSHN+A Sbjct: 231 LSHNQA 236>XP_005260150 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSHNEA 7 LSHN+A Sbjct: 231 LSHNQA 236>XP_005256932 Length = 2448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1150 LTSHNQAS 1157>XP_006721667 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1082 LTSHNQAS 1089>XP_005256931 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1092 LTSHNQAS 1099>XP_005256930 Length = 2508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1134 LTSHNQAS 1141>XP_006721666 Length = 2511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1150 LTSHNQAS 1157>XP_005256929 Length = 2514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1140 LTSHNQAS 1147>XP_005256928 Length = 2515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1141 LTSHNQAS 1148>XP_006721665 Length = 2523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1149 LTSHNQAS 1156>XP_005256925 Length = 2523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1149 LTSHNQAS 1156>XP_005256924 Length = 2524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1150 LTSHNQAS 1157>XP_006721664 Length = 2524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1150 LTSHNQAS 1157>XP_005256923 Length = 2524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLSHNEAA 8 L SHN+A+ Sbjct: 1150 LTSHNQAS 1157>XP_005254450 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLSHNEAA 8 + HNEAA Sbjct: 1095 IYEHNEAA 1102>XP_005254449 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LLSHNEAA 8 + HNEAA Sbjct: 1095 IYEHNEAA 1102>XP_006718399 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 6 LMFHPEAAR 14>XP_006718398 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>XP_006718397 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>XP_006718396 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>XP_006718395 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>XP_006718394 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319>XP_006718393 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSHNEAAR 9 L+ H EAAR Sbjct: 311 LMFHPEAAR 319Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.120 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,501 Number of extensions: 404 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |