Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 NP_653080 20 509 XP_005267292 20 509 XP_005267291 20 509 XP_005267290 20 509 NP_001135444 17 3301 NP_061720 17 4312 NP_004583 16 5631 NP_001248340 16 5631 NP_065075 16 5631 XP_006719621 16 5631 XP_005246749 16 5631 XP_005246746 16 5631 NP_001120729 16 5631 NP_071349 16 7355 NP_004288 16 7355 NP_002058 16 7355 NP_002063 16 7355 XP_005257625 16 7355 XP_005257624 16 7355 NP_055444 15 9605 NP_055873 15 9605 NP_689805 15 9605 NP_653297 15 9605 NP_064541 15 9605 NP_775745 15 9605 NP_001257696 15 9605 NP_001257695 15 9605 XP_006725174 15 9605 XP_006725173 15 9605 XP_006725172 15 9605 XP_006725171 15 9605 XP_006725170 15 9605 XP_006725169 15 9605 XP_006725168 15 9605 XP_006725167 15 9605 XP_006720130 15 9605 XP_006720128 15 9605 XP_006720127 15 9605 XP_006720126 15 9605 XP_005267433 15 9605 XP_005267434 15 9605 XP_006719854 15 9605 XP_006719853 15 9605 XP_005266099 15 9605 XP_006716304 15 9605 XP_006716303 15 9605 XP_006716302 15 9605 XP_005266098 15 9605 XP_005266097 15 9605 XP_005266096 15 9605 XP_006716301 15 9605 XP_006715822 15 9605 XP_005249870 15 9605 XP_005249869 15 9605 XP_006711224 15 9605 XP_006711223 15 9605 XP_006711222 15 9605 XP_006711221 15 9605 XP_006711220 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 LSEYDAVE Sbjct: 849 LSEYDAVE 856>NP_653080 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 LSEYDAVE Sbjct: 751 LSEYDAVE 758>XP_005267292 Length = 1677 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 LSEYDAVE Sbjct: 744 LSEYDAVE 751>XP_005267291 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 LSEYDAVE Sbjct: 751 LSEYDAVE 758>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 LSEYDAVE Sbjct: 849 LSEYDAVE 856>NP_001135444 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLSEYDAV 8 LL+EYDA+ Sbjct: 111 LLAEYDAL 118>NP_061720 Length = 4024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LLSEYDAVE 9 +++E+DAVE Sbjct: 908 MITEWDAVE 916>NP_004583 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 LSEYDA Sbjct: 83 LSEYDA 88>NP_001248340 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 LSEYDA Sbjct: 83 LSEYDA 88>NP_065075 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 L EYDAV Sbjct: 489 LEEYDAV 495>XP_006719621 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 LSEYDA Sbjct: 83 LSEYDA 88>XP_005246749 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 L EYDAV Sbjct: 39 LEEYDAV 45>XP_005246746 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 L EYDAV Sbjct: 556 LEEYDAV 562>NP_001120729 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 L EYDAV Sbjct: 489 LEEYDAV 495>NP_071349 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 S+YD+VE Sbjct: 717 SDYDSVE 723>NP_004288 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 LSEYD V Sbjct: 228 LSEYDQV 234>NP_002058 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 LSEYD V Sbjct: 232 LSEYDQV 238>NP_002063 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEYDAV 8 LSEYD V Sbjct: 232 LSEYDQV 238>XP_005257625 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 S+YD+VE Sbjct: 693 SDYDSVE 699>XP_005257624 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 S+YD+VE Sbjct: 718 SDYDSVE 724>NP_055444 Length = 1344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 464 VSEWDSVE 471>NP_055873 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 +SEYDA Sbjct: 1632 MSEYDA 1637>NP_689805 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>NP_653297 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 535 LLSKYDTLK 543>NP_064541 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLS+YD E Sbjct: 182 LLSKYDPEE 190>NP_775745 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLSE+D E Sbjct: 143 LLSEFDRQE 151>NP_001257696 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLSE+D E Sbjct: 38 LLSEFDRQE 46>NP_001257695 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLSE+D E Sbjct: 38 LLSEFDRQE 46>XP_006725174 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 426 VSEWDSVE 433>XP_006725173 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_006725172 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 449 VSEWDSVE 456>XP_006725171 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 450 VSEWDSVE 457>XP_006725170 Length = 1345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 465 VSEWDSVE 472>XP_006725169 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_006725168 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 488 VSEWDSVE 495>XP_006725167 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_006720130 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720128 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720127 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720126 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_005267433 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_005267434 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYDAVE 9 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006719854 Length = 1550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 +SEYDA Sbjct: 1277 MSEYDA 1282>XP_006719853 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSEYDA 7 +SEYDA Sbjct: 1536 MSEYDA 1541>XP_005266099 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 426 VSEWDSVE 433>XP_006716304 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_006716303 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 449 VSEWDSVE 456>XP_006716302 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 450 VSEWDSVE 457>XP_005266098 Length = 1345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 465 VSEWDSVE 472>XP_005266097 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_005266096 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 488 VSEWDSVE 495>XP_006716301 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEYDAVE 9 +SE+D+VE Sbjct: 489 VSEWDSVE 496>XP_006715822 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLS+YD E Sbjct: 182 LLSKYDPEE 190>XP_005249870 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLS+YD E Sbjct: 182 LLSKYDPEE 190>XP_005249869 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLSEYDAVE 9 LLS+YD E Sbjct: 190 LLSKYDPEE 198>XP_006711224 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 535 LLSKYDTLK 543>XP_006711223 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 535 LLSKYDTLK 543>XP_006711222 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 493 LLSKYDTLK 501>XP_006711221 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 535 LLSKYDTLK 543>XP_006711220 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLSEYDAVE 9 LLS+YD ++ Sbjct: 535 LLSKYDTLK 543Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.129 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,959 Number of extensions: 457 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |