Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_859049 17 2528 NP_001269781 17 2528 NP_659449 17 2528 NP_057043 17 2528 NP_001269782 17 2528 NP_001269783 17 2528 NP_001135772 17 2528 NP_001137484 17 2528 XP_005252445 17 2528 XP_006717455 17 2528 XP_005246400 17 2528 NP_689736 17 2528 NP_001075019 17 3301 XP_006724836 17 3301 XP_005262507 17 3301 XP_006724835 17 3301 XP_006724834 17 3301 XP_006724833 17 3301 XP_006724832 17 3301 XP_006724831 17 3301 XP_006724830 17 3301 XP_005262504 17 3301 NP_001099133 17 4312 NP_001230589 17 4312 NP_001230590 17 4312 NP_001032 16 5631 NP_001268885 16 5631 NP_653314 16 7355 NP_001714 16 7355 NP_005236 16 7355 NP_036467 16 7355 NP_444504 16 7355 NP_060382 16 7355 NP_036229 16 7355 NP_001158608 16 7355 XP_005272534 16 7355 XP_005272533 16 7355 XP_005272532 16 7355 XP_005249383 16 7355 XP_005263140 16 7355 XP_006714202 16 7355 XP_005262892 16 7355 XP_005262891 16 7355 XP_006712935 16 7355 XP_006712934 16 7355 XP_006712933 16 7355 XP_006712016 16 7355 XP_006710372 16 7355 XP_005270458 16 7355 XP_005270457 16 7355 NP_852118 16 7355 NP_060034 15 9605 NP_003744 15 9605 XP_006719539 15 9605 XP_005252650 15 9605 XP_006717569 15 9605 XP_006717568 15 9605 XP_006717567 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLQFNLNEL 9 LLQFNL+EL Sbjct: 165 LLQFNLSEL 173>NP_859049 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269781 Length = 316 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 234 LLQFNIN 240>NP_659449 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 259 LLQFNIN 265>NP_057043 Length = 296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 +FNLNEL Sbjct: 254 EFNLNEL 260>NP_001269782 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269783 Length = 208 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 126 LLQFNIN 132>NP_001135772 Length = 308 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 228 LLQFNIN 234>NP_001137484 Length = 258 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 +FNLNEL Sbjct: 216 EFNLNEL 222>XP_005252445 Length = 294 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 212 LLQFNIN 218>XP_006717455 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 235 LLQFNIN 241>XP_005246400 Length = 359 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 279 LLQFNIN 285>NP_689736 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLQFNLN 7 LLQFN+N Sbjct: 209 LLQFNIN 215>NP_001075019 Length = 1593 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724836 Length = 1582 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_005262507 Length = 1594 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724835 Length = 1615 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724834 Length = 1615 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724833 Length = 1620 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724832 Length = 1640 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724831 Length = 1640 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_006724830 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>XP_005262504 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 LLQFNL +L Sbjct: 273 LLQFNLIDL 281>NP_001099133 Length = 238 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQFNLNEL 9 +QFNLN++ Sbjct: 212 VQFNLNDV 219>NP_001230589 Length = 223 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQFNLNEL 9 +QFNLN++ Sbjct: 197 VQFNLNDV 204>NP_001230590 Length = 185 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQFNLNEL 9 +QFNLN++ Sbjct: 159 VQFNLNDV 166>NP_001032 Length = 1827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQFNLNE 8 +QFNLN+ Sbjct: 1743 VQFNLNQ 1749>NP_001268885 Length = 3631 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 QFNLN++ Sbjct: 2812 QFNLNDV 2818>NP_653314 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FNLNE+ Sbjct: 154 FNLNEI 159>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQFNLNE 8 L FN+NE Sbjct: 2399 LHFNINE 2405>NP_005236 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 QF++NEL Sbjct: 3171 QFSINEL 3177>NP_036467 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L FN+NE+ Sbjct: 1060 LSFNVNEV 1067>NP_444504 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLQFNLNEL 9 LLQFN+ + Sbjct: 312 LLQFNMGHI 320>NP_060382 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FN+NEL Sbjct: 584 FNINEL 589>NP_036229 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLQFNLNEL 9 L QF++NE+ Sbjct: 33 LYQFSMNEV 41>NP_001158608 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FN+NEL Sbjct: 584 FNINEL 589>XP_005272534 Length = 1071 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L FN+NE+ Sbjct: 1033 LSFNVNEV 1040>XP_005272533 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L FN+NE+ Sbjct: 1058 LSFNVNEV 1065>XP_005272532 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L FN+NE+ Sbjct: 1062 LSFNVNEV 1069>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQFNLNE 8 L FN+NE Sbjct: 2936 LHFNINE 2942>XP_005263140 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FN+NEL Sbjct: 596 FNINEL 601>XP_006714202 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 QF++NEL Sbjct: 3171 QFSINEL 3177>XP_005262892 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 QF++NEL Sbjct: 3171 QFSINEL 3177>XP_005262891 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QFNLNEL 9 QF++NEL Sbjct: 3171 QFSINEL 3177>XP_006712935 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L+F +NEL Sbjct: 386 LEFKINEL 393>XP_006712934 Length = 1583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L+F +NEL Sbjct: 282 LEFKINEL 289>XP_006712933 Length = 1687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L+F +NEL Sbjct: 386 LEFKINEL 393>XP_006712016 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FNLNE+ Sbjct: 154 FNLNEI 159>XP_006710372 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLQFNLNEL 9 LLQFN+ + Sbjct: 145 LLQFNMGHI 153>XP_005270458 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLQFNLNEL 9 LLQFN+ + Sbjct: 270 LLQFNMGHI 278>XP_005270457 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLQFNLNEL 9 LLQFN+ + Sbjct: 312 LLQFNMGHI 320>NP_852118 Length = 1684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQFNLNEL 9 L+F +NEL Sbjct: 383 LEFKINEL 390>NP_060034 Length = 2551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FN+NEL Sbjct: 418 FNVNEL 423>NP_003744 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLQFNLNEL 9 +LQFNL L Sbjct: 114 MLQFNLQIL 122>XP_006719539 Length = 2246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FNLNEL 9 FN+NEL Sbjct: 418 FNVNEL 423>XP_005252650 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LLQFNLNEL 9 ++QF+LN++ Sbjct: 302 IIQFDLNKV 310>XP_006717569 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LLQFNLNEL 9 ++QF+LN++ Sbjct: 888 IIQFDLNKV 896>XP_006717568 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LLQFNLNEL 9 ++QF+LN++ Sbjct: 924 IIQFDLNKV 932>XP_006717567 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LLQFNLNEL 9 ++QF+LN++ Sbjct: 995 IIQFDLNKV 1003Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.148 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,141 Number of extensions: 757 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |