Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 665 NP_000242 19 665 XP_005264389 19 665 NP_000631 17 3301 NP_060595 17 4312 NP_001011722 17 4312 NP_060271 17 4312 XP_006710797 17 4312 XP_005245986 17 4312 XP_005245985 17 4312 XP_005245984 17 4312 XP_005245983 17 4312 XP_006710796 17 4312 XP_006710795 17 4312 XP_005245982 17 4312 XP_005245981 17 4312 XP_006710794 17 4312 XP_006710793 17 4312 XP_006710792 17 4312 XP_006710791 17 4312 XP_006710790 17 4312 XP_005245980 17 4312 NP_997465 16 5631 XP_006723231 16 5631 XP_005258877 16 5631 XP_005258876 16 5631 NP_054756 16 5631 NP_112191 16 7355 NP_001074924 16 7355 NP_066580 16 7355 NP_060474 16 7355 XP_005253535 16 7355 XP_005253534 16 7355 XP_005253531 16 7355 XP_005270251 16 7355 XP_005270250 16 7355 XP_006713895 16 7355 XP_005247980 16 7355 XP_005247979 16 7355 XP_005247978 16 7355 XP_005247626 16 7355 XP_005247625 16 7355 NP_602307 16 7355 NP_055694 16 7355 NP_001165882 15 9605 NP_001165883 15 9605 NP_620409 15 9605 NP_060341 15 9605 NP_001243391 15 9605 NP_001243389 15 9605 NP_001243392 15 9605 NP_001243385 15 9605 XP_006710999 15 9605 XP_006710998 15 9605 XP_005244820 15 9605 XP_006710778 15 9605 NP_001005323 15 9605>NP_001245210 Length = 868 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL VFVTP Sbjct: 365 LLLAVFVTP 373>NP_000242 Length = 934 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL VFVTP Sbjct: 431 LLLAVFVTP 439>XP_005264389 Length = 921 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL VFVTP Sbjct: 431 LLLAVFVTP 439>NP_000631 Length = 380 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 L+LV+FVT Sbjct: 352 LILVIFVT 359>NP_060595 Length = 1279 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 732 MVVFITP 738>NP_001011722 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 693 MVVFITP 699>NP_060271 Length = 183 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 L+L+V+ TP Sbjct: 84 LILIVYCTP 92>XP_006710797 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 493 MVVFITP 499>XP_005245986 Length = 1052 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 505 MVVFITP 511>XP_005245985 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 507 MVVFITP 513>XP_005245984 Length = 1057 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 510 MVVFITP 516>XP_005245983 Length = 1235 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 688 MVVFITP 694>XP_006710796 Length = 1236 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 689 MVVFITP 695>XP_006710795 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 692 MVVFITP 698>XP_005245982 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 693 MVVFITP 699>XP_005245981 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 694 MVVFITP 700>XP_006710794 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710793 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710792 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 696 MVVFITP 702>XP_006710791 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 697 MVVFITP 703>XP_006710790 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 697 MVVFITP 703>XP_005245980 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 +VVF+TP Sbjct: 697 MVVFITP 703>NP_997465 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLLV+ +TP Sbjct: 4 LLLVLILTP 12>XP_006723231 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 +LL++FVT Sbjct: 621 VLLIIFVT 628>XP_005258877 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 +LL++FVT Sbjct: 621 VLLIIFVT 628>XP_005258876 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 +LL++FVT Sbjct: 703 VLLIIFVT 710>NP_054756 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 +LL++FVT Sbjct: 621 VLLIIFVT 628>NP_112191 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL+V +TP Sbjct: 17 LLLLVVLTP 25>NP_001074924 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>NP_066580 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 LLL++FV+ Sbjct: 70 LLLIIFVS 77>NP_060474 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 L+LVVF+T Sbjct: 156 LVLVVFLT 163>XP_005253535 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 LLL++FV+ Sbjct: 68 LLLIIFVS 75>XP_005253534 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 LLL++FV+ Sbjct: 50 LLLIIFVS 57>XP_005253531 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 LLL++FV+ Sbjct: 70 LLLIIFVS 77>XP_005270251 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL+V +TP Sbjct: 17 LLLLVVLTP 25>XP_005270250 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLVVFVTP 9 LLL+V +TP Sbjct: 17 LLLLVVLTP 25>XP_006713895 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>XP_005247980 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>XP_005247979 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>XP_005247978 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>XP_005247626 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 L+LVVF+T Sbjct: 172 LVLVVFLT 179>XP_005247625 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 L+LVVF+T Sbjct: 172 LVLVVFLT 179>NP_602307 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LLLVVFVT 8 LLL++FV+ Sbjct: 70 LLLIIFVS 77>NP_055694 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLLVVFVT 8 LLL+VF T Sbjct: 200 LLLIVFYT 207>NP_001165882 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 L+VF+TP Sbjct: 119 LLVFLTP 125>NP_001165883 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 L+VF+TP Sbjct: 121 LLVFLTP 127>NP_620409 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 L+VF+TP Sbjct: 121 LLVFLTP 127>NP_060341 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 319 MVVFATP 325>NP_001243391 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 221 MVVFATP 227>NP_001243389 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 290 MVVFATP 296>NP_001243392 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 218 MVVFATP 224>NP_001243385 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 325 MVVFATP 331>XP_006710999 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 L+VF+TP Sbjct: 60 LLVFLTP 66>XP_006710998 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVVFVTP 9 L+VF+TP Sbjct: 121 LLVFLTP 127>XP_005244820 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 221 MVVFATP 227>XP_006710778 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LVVFVTP 9 +VVF TP Sbjct: 319 MVVFATP 325>NP_001005323 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLLVVFV 7 +LLVVFV Sbjct: 197 MLLVVFV 203Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.161 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,454 Number of extensions: 728 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |