Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 299 NP_060785 20 299 NP_361014 20 299 NP_060149 17 3301 NP_001092902 17 3301 XP_005257534 17 3301 XP_005257533 17 3301 XP_005257532 17 3301 XP_005257531 17 3301 XP_005257530 17 3301 XP_005257529 17 3301 NP_872311 17 4312 NP_001494 17 4312 NP_848593 17 4312 NP_001273385 17 4312 XP_006718220 17 4312 XP_006718219 17 4312 XP_006718218 17 4312 XP_005249342 17 4312 XP_005249075 17 4312 NP_056297 17 4312 NP_001006619 16 5631 NP_001006618 16 5631 NP_001006620 16 5631 NP_077022 16 5631 NP_005779 16 5631 NP_075067 16 5631 NP_001138639 16 5631 NP_001138638 16 5631 XP_005252787 16 5631 NP_005474 16 7355 NP_004563 16 7355 NP_001005242 16 7355 NP_031374 16 7355 NP_001276077 16 7355 NP_001276078 16 7355 NP_061138 16 7355 XP_005254945 16 7355 XP_005254944 16 7355 XP_006711287 16 7355 NP_079023 15 9605 NP_001783 15 9605 NP_000785 15 9605 NP_001248762 15 9605 NP_003763 15 9605 NP_003646 15 9605 NP_001078823 15 9605 NP_001106853 15 9605 NP_078933 15 9605 NP_003326 15 9605 NP_060687 15 9605 NP_001363 15 9605 NP_001075 15 9605 NP_001157968 15 9605 XP_006724755 15 9605 XP_006724754 15 9605 XP_005262247 15 9605 XP_005258239 15 9605 XP_005258238 15 9605 XP_006721530 15 9605 XP_006721529 15 9605 XP_006721528 15 9605 XP_005247674 15 9605 XP_006713762 15 9605 XP_006713761 15 9605 XP_006713760 15 9605 XP_006713759 15 9605 XP_005265487 15 9605 XP_006713384 15 9605 XP_006712889 15 9605 NP_001138497 15 9605 NP_699207 15 9605>NP_001013433 Length = 589 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLLLDFDVD 9 LL+LDFDVD Sbjct: 579 LLVLDFDVD 587>NP_060785 Length = 627 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLLLDFDVD 9 LL+LDFDVD Sbjct: 617 LLVLDFDVD 625>NP_361014 Length = 707 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLLLDFDVD 9 LL+LDFDVD Sbjct: 697 LLVLDFDVD 705>NP_060149 Length = 913 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 762 LLDFDTD 768>NP_001092902 Length = 928 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 777 LLDFDTD 783>XP_005257534 Length = 831 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 777 LLDFDTD 783>XP_005257533 Length = 835 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 777 LLDFDTD 783>XP_005257532 Length = 928 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 762 LLDFDTD 768>XP_005257531 Length = 935 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 762 LLDFDTD 768>XP_005257530 Length = 943 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 777 LLDFDTD 783>XP_005257529 Length = 950 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLDFDVD 9 LLDFD D Sbjct: 777 LLDFDTD 783>NP_872311 Length = 157 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LDFD+D Sbjct: 141 LDFDID 146>NP_001494 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 L +LDF+VD Sbjct: 454 LAVLDFNVD 462>NP_848593 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 L + DFDVD Sbjct: 223 LHIFDFDVD 231>NP_001273385 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLLLDFD 7 LLLLD+D Sbjct: 75 LLLLDYD 81>XP_006718220 Length = 391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 L + DFDVD Sbjct: 223 LHIFDFDVD 231>XP_006718219 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 L + DFDVD Sbjct: 223 LHIFDFDVD 231>XP_006718218 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 L + DFDVD Sbjct: 112 LHIFDFDVD 120>XP_005249342 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLLLDFD 7 LLLLD+D Sbjct: 75 LLLLDYD 81>XP_005249075 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 L +LDF+VD Sbjct: 291 LAVLDFNVD 299>NP_056297 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LLLLDFD 7 LLLLD+D Sbjct: 75 LLLLDYD 81>NP_001006619 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 ++L+D DVD Sbjct: 29 MVLIDHDVD 37>NP_001006618 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 ++L+D DVD Sbjct: 29 MVLIDHDVD 37>NP_001006620 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 ++L+D DVD Sbjct: 29 MVLIDHDVD 37>NP_077022 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 ++L+D DVD Sbjct: 29 MVLIDHDVD 37>NP_005779 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLL FDV+ Sbjct: 129 LLLQFDVE 136>NP_075067 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 LLLLD +VD Sbjct: 227 LLLLDRNVD 235>NP_001138639 Length = 454 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLL FDV+ Sbjct: 52 LLLQFDVE 59>NP_001138638 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLL FDV+ Sbjct: 67 LLLQFDVE 74>XP_005252787 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLL FDV+ Sbjct: 96 LLLQFDVE 103>NP_005474 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLDFDVD 9 LLD++VD Sbjct: 593 LLDYEVD 599>NP_004563 Length = 881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LLDFDV 8 LLDFD+ Sbjct: 549 LLDFDI 554>NP_001005242 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LLDFDV 8 LLDFD+ Sbjct: 505 LLDFDI 510>NP_031374 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LDFD+D Sbjct: 60 LDFDLD 65>NP_001276077 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 + LLD DVD Sbjct: 201 IFLLDRDVD 209>NP_001276078 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 + LLD DVD Sbjct: 137 IFLLDRDVD 145>NP_061138 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 + LLD DVD Sbjct: 228 IFLLDRDVD 236>XP_005254945 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 + LLD DVD Sbjct: 228 IFLLDRDVD 236>XP_005254944 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 + LLD DVD Sbjct: 137 IFLLDRDVD 145>XP_006711287 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LDFD+D Sbjct: 60 LDFDLD 65>NP_079023 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LLLLDF 6 LLLLDF Sbjct: 280 LLLLDF 285>NP_001783 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LD+D+D Sbjct: 626 LDYDID 631>NP_000785 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 ++LD+D D Sbjct: 422 VILDYDTD 429>NP_001248762 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LDFDV+ Sbjct: 398 LDFDVE 403>NP_003763 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LDFDV+ Sbjct: 398 LDFDVE 403>NP_003646 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLLLDFDVD 9 ++LLD D+D Sbjct: 462 VILLDSDLD 470>NP_001078823 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LDFDVD 9 LDFD D Sbjct: 233 LDFDTD 238>NP_001106853 Length = 2093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLLD D++ Sbjct: 838 LLLDIDIN 845>NP_078933 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LDFDVD 9 LDFD D Sbjct: 233 LDFDTD 238>NP_003326 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLLDFDV 8 LLLDF V Sbjct: 115 LLLDFQV 121>NP_060687 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 +DFD+D Sbjct: 105 VDFDID 110>NP_001363 Length = 4486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 +LLD D+D Sbjct: 2224 ILLDGDID 2231>NP_001075 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLLLDFDVD 9 LLLLD+ D Sbjct: 318 LLLLDYPPD 326>NP_001157968 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 979 DFDVD 983>XP_006724755 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LDFDVD 9 LDFD D Sbjct: 233 LDFDTD 238>XP_006724754 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LDFDVD 9 LDFD D Sbjct: 111 LDFDTD 116>XP_005262247 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LDFDVD 9 LDFD D Sbjct: 141 LDFDTD 146>XP_005258239 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LD+D+D Sbjct: 595 LDYDID 600>XP_005258238 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 LD+D+D Sbjct: 608 LDYDID 613>XP_006721530 Length = 2746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 +LLD D+D Sbjct: 2224 ILLDGDID 2231>XP_006721529 Length = 2817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 +LLD D+D Sbjct: 2224 ILLDGDID 2231>XP_006721528 Length = 3869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 +LLD D+D Sbjct: 2224 ILLDGDID 2231>XP_005247674 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 214 DFDVD 218>XP_006713762 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 1023 DFDVD 1027>XP_006713761 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 679 DFDVD 683>XP_006713760 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 972 DFDVD 976>XP_006713759 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 DFDVD 9 DFDVD Sbjct: 1023 DFDVD 1027>XP_005265487 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLLDFDV 8 LLLDF V Sbjct: 115 LLLDFQV 121>XP_006713384 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLLDFDV 8 LLLDF V Sbjct: 115 LLLDFQV 121>XP_006712889 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLDFDVD 9 LLLD D++ Sbjct: 855 LLLDIDIN 862>NP_001138497 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LDFDVD 9 +DFD+D Sbjct: 68 VDFDID 73>NP_699207 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LLLLDFD 7 LLL+DF+ Sbjct: 403 LLLIDFE 409Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.169 0.478 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 547,347 Number of extensions: 846 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |