Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_079321 17 4312 XP_005261808 17 4312 NP_892006 16 7355 NP_149062 16 7355 NP_597721 16 7355 NP_001007170 16 7355 NP_665804 16 7355 NP_006715 16 7355 NP_005913 16 7355 NP_002193 16 7355 XP_006726495 16 7355 XP_005276346 16 7355 XP_003961039 16 7355 XP_005271850 16 7355 XP_005267046 16 7355 XP_005267045 16 7355 XP_006715488 16 7355 XP_006715487 16 7355 XP_006715486 16 7355 XP_006715485 16 7355 XP_006715484 16 7355 XP_006715483 16 7355 XP_006715482 16 7355 XP_006715481 16 7355 XP_006715480 16 7355 XP_006715479 16 7355 XP_006715478 16 7355 XP_006715477 16 7355 XP_006715476 16 7355 XP_006715475 16 7355 XP_006715474 16 7355 XP_006715473 16 7355 XP_006715472 16 7355 XP_006715471 16 7355 XP_006715470 16 7355 NP_001008711 15 9605 NP_001008710 15 9605 NP_006858 15 9605 NP_001008712 15 9605 XP_005273447 15 9605 XP_005273443 15 9605 XP_006716342 15 9605 XP_006716341 15 9605 XP_006716340 15 9605 XP_005246783 15 9605 NP_065994 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLKMTSMSP 9 LL+MTSMSP Sbjct: 2562 LLEMTSMSP 2570>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LLKMTSMSP 9 LL+MTSMSP Sbjct: 2562 LLEMTSMSP 2570>NP_079321 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 + MTSMSP Sbjct: 399 MTSMTSMSP 407>XP_005261808 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 + MTSMSP Sbjct: 399 MTSMTSMSP 407>NP_892006 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7400 MLKFSSMAP 7408>NP_149062 Length = 8749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7329 MLKFSSMAP 7337>NP_597721 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 L KMT++SP Sbjct: 7 LNKMTAISP 15>NP_001007170 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 L KMT++SP Sbjct: 7 LNKMTAISP 15>NP_665804 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 L++MT +SP Sbjct: 224 LVEMTGLSP 232>NP_006715 Length = 1558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLKMTSMS 8 LLK+TS+S Sbjct: 232 LLKLTSVS 239>NP_005913 Length = 1608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLKMTSMS 8 LLK+TS+S Sbjct: 232 LLKLTSVS 239>NP_002193 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 L++MT +SP Sbjct: 214 LVEMTGLSP 222>XP_006726495 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 LLK+TS P Sbjct: 253 LLKLTSPGP 261>XP_005276346 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 LLK+TS P Sbjct: 226 LLKLTSPGP 234>XP_003961039 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 LLK+TS P Sbjct: 253 LLKLTSPGP 261>XP_005271850 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 LLK+TS P Sbjct: 226 LLKLTSPGP 234>XP_005267046 Length = 1554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLKMTSMS 8 LLK+TS+S Sbjct: 232 LLKLTSVS 239>XP_005267045 Length = 1604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LLKMTSMS 8 LLK+TS+S Sbjct: 232 LLKLTSVS 239>XP_006715488 Length = 8721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715487 Length = 8744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715486 Length = 8758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715485 Length = 8793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7359 MLKFSSMAP 7367>XP_006715484 Length = 8794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7360 MLKFSSMAP 7368>XP_006715483 Length = 8795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7361 MLKFSSMAP 7369>XP_006715482 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7400 MLKFSSMAP 7408>XP_006715481 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7365 MLKFSSMAP 7373>XP_006715480 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7365 MLKFSSMAP 7373>XP_006715479 Length = 8804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7407 MLKFSSMAP 7415>XP_006715478 Length = 8809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715477 Length = 8822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7388 MLKFSSMAP 7396>XP_006715476 Length = 8823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715475 Length = 8827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7407 MLKFSSMAP 7415>XP_006715474 Length = 8829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7395 MLKFSSMAP 7403>XP_006715473 Length = 8832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>XP_006715472 Length = 8839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7405 MLKFSSMAP 7413>XP_006715471 Length = 8842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7408 MLKFSSMAP 7416>XP_006715470 Length = 8846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LLKMTSMSP 9 +LK +SM+P Sbjct: 7412 MLKFSSMAP 7420>NP_001008711 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>NP_001008710 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>NP_006858 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>NP_001008712 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_005273447 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_005273443 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_006716342 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_006716341 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_006716340 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LLKMTSMSP 9 L+K+TS P Sbjct: 54 LIKLTSKQP 62>XP_005246783 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKMTSMSP 9 LK+T +SP Sbjct: 302 LKLTQVSP 309>NP_065994 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKMTSMSP 9 LK+T +SP Sbjct: 302 LKLTQVSP 309Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.119 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 332,063 Number of extensions: 552 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |