Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_061182 18 1135 NP_001123509 18 1135 NP_001013433 18 1935 NP_060785 18 1935 NP_361014 18 1935 NP_116195 17 4312 NP_057306 17 4312 XP_006714933 17 4312 XP_006714215 17 4312 XP_006714214 17 4312 XP_005262915 17 4312 XP_006713424 17 4312 XP_005265572 17 4312 NP_039227 17 4312 NP_039228 17 4312 NP_001004466 17 4312 NP_055806 17 4312 NP_001004465 17 4312 NP_001265426 16 5631 NP_001265429 16 5631 NP_001265427 16 5631 NP_000666 16 5631 NP_001265428 16 5631 NP_009155 16 5631 NP_000005 16 5631 XP_006726604 16 5631 XP_006726603 16 5631 XP_006725215 16 5631 XP_006719240 16 5631 XP_006719237 16 5631 XP_006719119 16 5631 NP_694574 16 7355 NP_683692 16 7355 NP_005217 16 7355 XP_005256319 16 7355 XP_006721414 16 7355 XP_005248208 16 7355 XP_005248207 16 7355 XP_006714021 16 7355 NP_775882 15 9605 NP_001261 15 9605 NP_002855 15 9605 NP_001819 15 9605 NP_001307 15 9605 XP_006726852 15 9605 XP_006723594 15 9605 XP_005271924 15 9605 XP_005271923 15 9605 XP_006710109 15 9605 NP_076423 15 9605 NP_001001968 15 9605>NP_061182 Length = 334 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L YN+LVSG Sbjct: 246 LAYNLLVSG 254>NP_001123509 Length = 326 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L YN+LVSG Sbjct: 238 LAYNLLVSG 246>NP_001013433 Length = 589 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 LK NILVSG Sbjct: 471 LKDNILVSG 479>NP_060785 Length = 627 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 LK NILVSG Sbjct: 509 LKDNILVSG 517>NP_361014 Length = 707 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 LK NILVSG Sbjct: 589 LKDNILVSG 597>NP_116195 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 K NILVSG Sbjct: 254 KANILVSG 261>NP_057306 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 KY+ILV G Sbjct: 166 KYHILVEG 173>XP_006714933 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 KY+ILV G Sbjct: 40 KYHILVEG 47>XP_006714215 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L Y+I+VSG Sbjct: 3155 LAYHIIVSG 3163>XP_006714214 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L Y+I+VSG Sbjct: 3155 LAYHIIVSG 3163>XP_005262915 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L Y+I+VSG Sbjct: 3155 LAYHIIVSG 3163>XP_006713424 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 K NILVSG Sbjct: 254 KANILVSG 261>XP_005265572 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 K NILVSG Sbjct: 254 KANILVSG 261>NP_039227 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 L+YN+L+S Sbjct: 130 LRYNVLMS 137>NP_039228 Length = 318 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 L+YN+L+S Sbjct: 130 LRYNVLMS 137>NP_001004466 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 L+YN+L+S Sbjct: 130 LRYNVLMS 137>NP_055806 Length = 3526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L Y+I+VSG Sbjct: 3137 LAYHIIVSG 3145>NP_001004465 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 L+YN+L+S Sbjct: 131 LRYNVLMS 138>NP_001265426 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+YN LV+G Sbjct: 110 LRYNGLVTG 118>NP_001265429 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+YN LV+G Sbjct: 110 LRYNGLVTG 118>NP_001265427 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+YN LV+G Sbjct: 110 LRYNGLVTG 118>NP_000666 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+YN LV+G Sbjct: 110 LRYNGLVTG 118>NP_001265428 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+YN LV+G Sbjct: 110 LRYNGLVTG 118>NP_009155 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LKYNILVSG 9 LK+++LV+G Sbjct: 118 LKFSLLVTG 126>NP_000005 Length = 1474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKYNIL 6 LKYNIL Sbjct: 1328 LKYNIL 1333>XP_006726604 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKYNILV 7 LKYN+L+ Sbjct: 107 LKYNVLL 113>XP_006726603 Length = 1264 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKYNILV 7 LKYN+L+ Sbjct: 1125 LKYNVLL 1131>XP_006725215 Length = 1264 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKYNILV 7 LKYN+L+ Sbjct: 1125 LKYNVLL 1131>XP_006719240 Length = 113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKYNILV 7 LKYN+L+ Sbjct: 21 LKYNVLL 27>XP_006719237 Length = 1263 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKYNILV 7 LKYN+L+ Sbjct: 1124 LKYNVLL 1130>XP_006719119 Length = 1512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKYNIL 6 LKYNIL Sbjct: 1328 LKYNIL 1333>NP_694574 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 ++YNILV+ Sbjct: 345 MEYNILVN 352>NP_683692 Length = 3051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YNILVSG 9 Y++LVSG Sbjct: 2008 YDVLVSG 2014>NP_005217 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 K NIL+SG Sbjct: 93 KVNILMSG 100>XP_005256319 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 ++YNILV+ Sbjct: 345 MEYNILVN 352>XP_006721414 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 ++YNILV+ Sbjct: 259 MEYNILVN 266>XP_005248208 Length = 3097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YNILVSG 9 Y++LVSG Sbjct: 2008 YDVLVSG 2014>XP_005248207 Length = 3098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YNILVSG 9 Y++LVSG Sbjct: 2008 YDVLVSG 2014>XP_006714021 Length = 3112 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YNILVSG 9 Y++LVSG Sbjct: 2008 YDVLVSG 2014>NP_775882 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YNILVSG 9 Y++L+SG Sbjct: 95 YSVLISG 101>NP_001261 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 LK+NIL++ Sbjct: 584 LKFNILLT 591>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LKYNIL 6 +KYNIL Sbjct: 1334 MKYNIL 1339>NP_001819 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KYNILVSG 9 KY ++V+G Sbjct: 99 KYQVMVNG 106>NP_001307 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 +KY++LVS Sbjct: 308 VKYDLLVS 315>XP_006726852 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKYNILVSG 9 + YN+ VSG Sbjct: 60 IDYNVEVSG 68>XP_006723594 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKYNILVSG 9 + YN+ VSG Sbjct: 60 IDYNVEVSG 68>XP_005271924 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 LK+NIL++ Sbjct: 584 LKFNILLT 591>XP_005271923 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKYNILVS 8 LK+NIL++ Sbjct: 584 LKFNILLT 591>XP_006710109 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKYNILVSG 9 + YN+ VSG Sbjct: 60 IDYNVEVSG 68>NP_076423 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 +K N+LV+G Sbjct: 169 VKKNVLVTG 177>NP_001001968 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKYNILVSG 9 L+Y +L+SG Sbjct: 132 LRYPLLMSG 140Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.145 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,170 Number of extensions: 812 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |