Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060719 17 2528 NP_001258968 17 2528 NP_001011649 17 2528 NP_001185761 17 2528 NP_071754 17 2528 NP_808592 17 2528 NP_004306 17 2528 NP_001185763 17 2528 NP_001002810 17 2528 NP_055459 17 2528 NP_001182189 17 2528 NP_001002812 17 2528 NP_001182190 17 2528 XP_006717248 17 2528 XP_006717247 17 2528 XP_006717246 17 2528 XP_006717245 17 2528 XP_006717244 17 2528 XP_006717243 17 2528 XP_006717242 17 2528 XP_005273561 17 2528 XP_006711719 17 2528 XP_006711717 17 2528 XP_006711716 17 2528 XP_006711715 17 2528 XP_006711714 17 2528 XP_006711713 17 2528 XP_006711710 17 2528 XP_006711709 17 2528 NP_001182073 16 5631 XP_005247005 16 5631 XP_006712901 16 5631 XP_005247004 16 5631 XP_005247003 16 5631 XP_005247002 16 5631 NP_443091 16 7355 NP_060627 16 7355 XP_005269056 16 7355 XP_005269055 16 7355 XP_005265594 16 7355 XP_006713447 16 7355 NP_001136245 15 9605 NP_001136239 15 9605 NP_001136236 15 9605 NP_001136244 15 9605 NP_001136238 15 9605 NP_001136240 15 9605 NP_001136243 15 9605 NP_001136242 15 9605 NP_001136235 15 9605 NP_001136237 15 9605 NP_001136241 15 9605 NP_149045 15 9605 XP_006718013 15 9605>NP_060719 Length = 1893 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>NP_001258968 Length = 1663 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>NP_001011649 Length = 1814 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>NP_001185761 Length = 2240 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>NP_071754 Length = 310 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 188 LKVEVESLK 196>NP_808592 Length = 395 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV+V SLK Sbjct: 73 LKVIVNSLK 81>NP_004306 Length = 411 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV+V SLK Sbjct: 89 LKVIVNSLK 97>NP_001185763 Length = 2362 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>NP_001002810 Length = 173 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>NP_055459 Length = 2346 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>NP_001182189 Length = 141 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 19 LKVEVESLK 27>NP_001002812 Length = 969 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>NP_001182190 Length = 176 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 54 LKVEVESLK 62>XP_006717248 Length = 1664 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>XP_006717247 Length = 1670 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>XP_006717246 Length = 1820 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>XP_006717245 Length = 1861 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>XP_006717244 Length = 1867 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 106 LKVEVESLK 114>XP_006717243 Length = 1889 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 96 LKVEVESLK 104>XP_006717242 Length = 1898 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 105 LKVEVESLK 113>XP_005273561 Length = 373 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV+V SLK Sbjct: 51 LKVIVNSLK 59>XP_006711719 Length = 2302 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>XP_006711717 Length = 2385 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>XP_006711716 Length = 2411 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>XP_006711715 Length = 2428 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>XP_006711714 Length = 2429 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 51 LKVEVESLK 59>XP_006711713 Length = 2432 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 54 LKVEVESLK 62>XP_006711710 Length = 2494 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>XP_006711709 Length = 2495 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKVVVESLK 9 LKV VESLK Sbjct: 117 LKVEVESLK 125>NP_001182073 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 954 LKVVVEEL 961>XP_005247005 Length = 994 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 972 LKVVVEEL 979>XP_006712901 Length = 997 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 972 LKVVVEEL 979>XP_005247004 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 972 LKVVVEEL 979>XP_005247003 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 954 LKVVVEEL 961>XP_005247002 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKVVVE L Sbjct: 972 LKVVVEEL 979>NP_443091 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKV+ ESL Sbjct: 151 LKVIAESL 158>NP_060627 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VVVESLK 9 V+VESLK Sbjct: 113 VIVESLK 119>XP_005269056 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VVVESLK 9 V+VESLK Sbjct: 113 VIVESLK 119>XP_005269055 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VVVESLK 9 V+VESLK Sbjct: 113 VIVESLK 119>XP_005265594 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKV+ ESL Sbjct: 151 LKVIAESL 158>XP_006713447 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVVVESL 8 LKV+ ESL Sbjct: 151 LKVIAESL 158>NP_001136245 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1261 KVVVESI 1267>NP_001136239 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1246 KVVVESI 1252>NP_001136236 Length = 1957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289>NP_001136244 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289>NP_001136238 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289>NP_001136240 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1261 KVVVESI 1267>NP_001136243 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1288 KVVVESI 1294>NP_001136242 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289>NP_001136235 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1288 KVVVESI 1294>NP_001136237 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1212 KVVVESI 1218>NP_001136241 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1295 KVVVESI 1301>NP_149045 Length = 1955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289>XP_006718013 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVVESL 8 KVVVES+ Sbjct: 1283 KVVVESI 1289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.133 0.294 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 221,679 Number of extensions: 179 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |