Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 390 NP_817089 17 3301 NP_115267 17 3301 NP_061746 17 3301 NP_689804 17 4312 NP_001273173 17 4312 NP_001273172 17 4312 XP_006719326 17 4312 XP_006719325 17 4312 NP_005430 16 5631 NP_061885 16 7355 NP_001171809 16 7355 NP_116564 16 7355 NP_001098713 16 7355 NP_065817 16 7355 NP_001398 16 7355 NP_001243716 16 7355 NP_001243399 16 7355 NP_001137293 16 7355 NP_689963 16 7355 NP_001784 16 7355 NP_060127 16 7355 XP_005262224 16 7355 XP_005262223 16 7355 XP_005262222 16 7355 XP_006719159 16 7355 XP_006719158 16 7355 XP_006719157 16 7355 XP_006719156 16 7355 XP_006719155 16 7355 XP_005253457 16 7355 XP_006719154 16 7355 XP_005253456 16 7355 XP_005253455 16 7355 XP_006719153 16 7355 XP_006719152 16 7355 XP_005250282 16 7355 XP_006715968 16 7355 XP_005250281 16 7355 XP_005250280 16 7355 XP_005264437 16 7355 NP_982261 16 7355 NP_001002243 16 7355 NP_115266 16 7355 NP_061745 16 7355 NP_004412 15 9605 NP_079150 15 9605 NP_000364 15 9605 NP_001243497 15 9605 NP_775901 15 9605 NP_003612 15 9605 NP_001243498 15 9605 XP_005266736 15 9605 XP_006722498 15 9605 XP_006722497 15 9605 XP_006718416 15 9605 XP_006718415 15 9605 XP_006718414 15 9605 XP_006718413 15 9605 XP_005253234 15 9605 XP_006718412 15 9605 XP_005253233 15 9605 XP_005253232 15 9605 XP_005253231 15 9605 XP_006710974 15 9605 XP_006710973 15 9605 XP_006710972 15 9605 XP_006710971 15 9605 XP_006710970 15 9605 XP_005244790 15 9605 XP_005244789 15 9605 XP_005244788 15 9605>NP_004351 Length = 882 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKVTDANAP 9 LKVTDA+AP Sbjct: 396 LKVTDADAP 404>NP_817089 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKVTDANAP 9 ++VTDAN P Sbjct: 385 VQVTDANDP 393>NP_115267 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 +KVTDAN Sbjct: 230 IKVTDAN 236>NP_061746 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 +KVTDAN Sbjct: 230 IKVTDAN 236>NP_689804 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 KVTD N P Sbjct: 437 KVTDINLP 444>NP_001273173 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 KVTD N P Sbjct: 358 KVTDINLP 365>NP_001273172 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 KVTD N P Sbjct: 397 KVTDINLP 404>XP_006719326 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 KVTD N P Sbjct: 437 KVTDINLP 444>XP_006719325 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 KVTD N P Sbjct: 437 KVTDINLP 444>NP_005430 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVTDANAP 9 L +TD N P Sbjct: 41 LSITDGNMP 49>NP_061885 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>NP_001171809 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 +KVTD+N Sbjct: 226 IKVTDSN 232>NP_116564 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 LK+T+ N P Sbjct: 151 LKITERNFP 159>NP_001098713 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 +KVTD+N Sbjct: 226 IKVTDSN 232>NP_065817 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 +KVTD+N Sbjct: 226 IKVTDSN 232>NP_001398 Length = 3312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 L+ TD +AP Sbjct: 455 LRATDGDAP 463>NP_001243716 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 171 KITSENAP 178>NP_001243399 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 285 KITSENAP 292>NP_001137293 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>NP_689963 Length = 885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 ++VTD N P Sbjct: 121 VQVTDVNEP 129>NP_001784 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 L VTD +AP Sbjct: 349 LTVTDLDAP 357>NP_060127 Length = 909 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LKVTDA A Sbjct: 839 LKVTDAFA 846>XP_005262224 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 LK+T+ N P Sbjct: 88 LKITERNFP 96>XP_005262223 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 LK+T+ N P Sbjct: 88 LKITERNFP 96>XP_005262222 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 LK+T+ N P Sbjct: 151 LKITERNFP 159>XP_006719159 Length = 1276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719158 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719157 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 171 KITSENAP 178>XP_006719156 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719155 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_005253457 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719154 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_005253456 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_005253455 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719153 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_006719152 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KVTDANAP 9 K+T NAP Sbjct: 279 KITSENAP 286>XP_005250282 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 ++VTD N P Sbjct: 121 VQVTDVNEP 129>XP_006715968 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 ++VTD N P Sbjct: 121 VQVTDVNEP 129>XP_005250281 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 ++VTD N P Sbjct: 33 VQVTDVNEP 41>XP_005250280 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVTDANAP 9 ++VTD N P Sbjct: 33 VQVTDVNEP 41>XP_005264437 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LKVTDA A Sbjct: 867 LKVTDAFA 874>NP_982261 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LKVTDA A Sbjct: 867 LKVTDAFA 874>NP_001002243 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LKVTDA A Sbjct: 839 LKVTDAFA 846>NP_115266 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 ++VTDAN Sbjct: 227 IRVTDAN 233>NP_061745 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKVTDAN 7 ++VTDAN Sbjct: 227 IRVTDAN 233>NP_004412 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LK+T ANA Sbjct: 412 LKITIANA 419>NP_079150 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 764 LKVTDA 769>NP_000364 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 144 LKVTDA 149>NP_001243497 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 437 SDANAP 442>NP_775901 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 1249 LKVTDA 1254>NP_003612 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 549 SDANAP 554>NP_001243498 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 406 SDANAP 411>XP_005266736 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 337 LKVTDA 342>XP_006722498 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 1250 LKVTDA 1255>XP_006722497 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 1250 LKVTDA 1255>XP_006718416 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 417 SDANAP 422>XP_006718415 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 472 SDANAP 477>XP_006718414 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 483 SDANAP 488>XP_006718413 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 560 SDANAP 565>XP_005253234 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 549 SDANAP 554>XP_006718412 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 560 SDANAP 565>XP_005253233 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 610 SDANAP 615>XP_005253232 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 621 SDANAP 626>XP_005253231 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TDANAP 9 +DANAP Sbjct: 610 SDANAP 615>XP_006710974 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 406 LKVTDA 411>XP_006710973 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 406 LKVTDA 411>XP_006710972 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 764 LKVTDA 769>XP_006710971 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 764 LKVTDA 769>XP_006710970 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVTDA 6 LKVTDA Sbjct: 764 LKVTDA 769>XP_005244790 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LK+T ANA Sbjct: 412 LKITIANA 419>XP_005244789 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LK+T ANA Sbjct: 437 LKITIANA 444>XP_005244788 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVTDANA 8 LK+T ANA Sbjct: 437 LKITIANA 444Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.121 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 511,715 Number of extensions: 1082 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |