Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 390 NP_001087241 20 390 XP_006714101 20 390 XP_005265799 20 390 XP_005265798 20 390 XP_005265797 20 390 NP_001229392 17 4312 NP_001123357 17 4312 XP_005260582 16 5631 XP_006723932 16 5631 XP_006723931 16 5631 NP_001156001 16 7355 NP_062832 16 7355 NP_001074003 16 7355 XP_005254452 16 7355 XP_005254451 16 7355 XP_005248806 16 7355 XP_005248804 16 7355 XP_005248803 16 7355 XP_005248802 16 7355 XP_005248801 16 7355 XP_005248800 16 7355 NP_006781 15 9605 NP_001129412 15 9605 NP_002438 15 9605 NP_001231866 15 9605 NP_001177255 15 9605 NP_073557 15 9605 NP_055750 15 9605 NP_703152 15 9605 NP_148978 15 9605 NP_775885 15 9605 NP_001004060 15 9605 NP_001254824 15 9605 NP_001004067 15 9605 NP_597712 15 9605 NP_006192 15 9605 XP_006725258 15 9605 XP_006724598 15 9605 XP_006724597 15 9605 XP_005272672 15 9605 XP_005272671 15 9605 XP_006724331 15 9605 XP_005261390 15 9605 XP_005261387 15 9605 XP_005261386 15 9605 XP_006724195 15 9605 XP_005261385 15 9605 XP_005255375 15 9605 XP_006718533 15 9605 XP_005272186 15 9605 XP_005265227 15 9605 XP_006711286 15 9605 XP_005245025 15 9605 XP_005245024 15 9605 XP_006711285 15 9605 XP_006711284 15 9605 XP_006711283 15 9605 XP_006711282 15 9605 XP_006711281 15 9605 XP_006711280 15 9605 XP_006711279 15 9605 XP_006711278 15 9605 XP_006711277 15 9605 XP_005245023 15 9605 XP_006711276 15 9605 XP_006711275 15 9605 NP_001163931 15 9605 NP_699189 15 9605 NP_060698 15 9605 NP_055102 15 9605>NP_000213 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>NP_001087241 Length = 972 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>XP_006714101 Length = 526 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>XP_005265799 Length = 973 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>XP_005265798 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>XP_005265797 Length = 977 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKVRPAFK 8 LKVRPAFK Sbjct: 202 LKVRPAFK 209>NP_001229392 Length = 262 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRPAFK 8 VRPAFK Sbjct: 123 VRPAFK 128>NP_001123357 Length = 179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKVRPAFK 8 L V+PAFK Sbjct: 113 LHVKPAFK 120>XP_005260582 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 LKVRP K+ Sbjct: 16 LKVRPTRKI 24>XP_006723932 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 LKVRP K+ Sbjct: 16 LKVRPTRKI 24>XP_006723931 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 LKVRP K+ Sbjct: 16 LKVRPTRKI 24>NP_001156001 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 457 LKVRPA 462>NP_062832 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 L RPAF+V Sbjct: 233 LGTRPAFEV 241>NP_001074003 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KVRPAFK 8 ++RP+FK Sbjct: 967 RIRPSFK 973>XP_005254452 Length = 2188 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KVRPAFK 8 ++RP+FK Sbjct: 967 RIRPSFK 973>XP_005254451 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KVRPAFK 8 ++RP+FK Sbjct: 967 RIRPSFK 973>XP_005248806 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 483 LKVRPA 488>XP_005248804 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 320 LKVRPA 325>XP_005248803 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 397 LKVRPA 402>XP_005248802 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 457 LKVRPA 462>XP_005248801 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 483 LKVRPA 488>XP_005248800 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKVRPA 6 LKVRPA Sbjct: 483 LKVRPA 488>NP_006781 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 L+VRP F Sbjct: 454 LRVRPTF 460>NP_001129412 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 L+VRP F Sbjct: 270 LRVRPTF 276>NP_002438 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP F+V Sbjct: 1330 VRPTFRV 1336>NP_001231866 Length = 1351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP F+V Sbjct: 1281 VRPTFRV 1287>NP_001177255 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 LKVRP + Sbjct: 524 LKVRPVY 530>NP_073557 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 LKVRP + Sbjct: 524 LKVRPVY 530>NP_055750 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 856 RPAYKV 861>NP_703152 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 L V+P FK+ Sbjct: 120 LNVQPDFKI 128>NP_148978 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 492 RPAFRV 497>NP_775885 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326>NP_001004060 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326>NP_001254824 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>NP_001004067 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326>NP_597712 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>NP_006192 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 486 RPAFRV 491>XP_006725258 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326>XP_006724598 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 486 RPAFRV 491>XP_006724597 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 486 RPAFRV 491>XP_005272672 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 486 RPAFRV 491>XP_005272671 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 533 RPAFRV 538>XP_006724331 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 LKVRP + Sbjct: 167 LKVRPVY 173>XP_005261390 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>XP_005261387 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>XP_005261386 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>XP_006724195 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>XP_005261385 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP +KV Sbjct: 77 VRPTYKV 83>XP_005255375 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326>XP_006718533 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKVRPAFKV 9 L V+P FK+ Sbjct: 120 LNVQPDFKI 128>XP_005272186 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 L+VRP F Sbjct: 339 LRVRPTF 345>XP_005265227 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPAFKV 9 VRP F+V Sbjct: 1331 VRPTFRV 1337>XP_006711286 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 829 RPAYKV 834>XP_005245025 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 964 RPAYKV 969>XP_005245024 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 985 RPAYKV 990>XP_006711285 Length = 1193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1001 RPAYKV 1006>XP_006711284 Length = 1193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1001 RPAYKV 1006>XP_006711283 Length = 1193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1001 RPAYKV 1006>XP_006711282 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1035 RPAYKV 1040>XP_006711281 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1041 RPAYKV 1046>XP_006711280 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1059 RPAYKV 1064>XP_006711279 Length = 1254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1062 RPAYKV 1067>XP_006711278 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1064 RPAYKV 1069>XP_006711277 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1109 RPAYKV 1114>XP_005245023 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1089 RPAYKV 1094>XP_006711276 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1091 RPAYKV 1096>XP_006711275 Length = 1301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPA+KV Sbjct: 1109 RPAYKV 1114>NP_001163931 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 560 RPAFRV 565>NP_699189 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RPAFKV 9 RPAF+V Sbjct: 340 RPAFRV 345>NP_060698 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKVRPAF 7 LK+RP F Sbjct: 196 LKIRPYF 202>NP_055102 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKVRPAFKV 9 LK+ P F V Sbjct: 318 LKIEPVFHV 326Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.146 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 584,732 Number of extensions: 755 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |