Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 19 869 NP_733762 19 869 XP_006713860 19 869 XP_006713859 19 869 XP_005247910 19 869 XP_005247909 19 869 NP_001034568 17 2528 XP_005268301 17 2528 XP_006720407 17 2528 NP_057313 17 3301 XP_006718315 17 3301 XP_005253032 17 3301 XP_006718314 17 3301 XP_005253031 17 3301 XP_006718313 17 3301 XP_005253030 17 3301 NP_085143 17 4312 XP_006719218 17 4312 NP_000724 16 5631 NP_057092 16 5631 NP_056337 16 5631 XP_005264422 16 5631 XP_005264421 16 5631 NP_001180393 16 5631 NP_061921 16 5631 NP_006436 16 7355 NP_660339 16 7355 NP_065744 16 7355 NP_112536 16 7355 NP_001273660 16 7355 NP_997722 16 7355 XP_005258677 16 7355 XP_005246710 16 7355 NP_001106881 16 7355 NP_002776 16 7355 NP_976032 16 7355 NP_006197 15 9605 NP_000307 15 9605 NP_001171673 15 9605 NP_055598 15 9605 NP_955389 15 9605 XP_006725628 15 9605 XP_006725627 15 9605 XP_005254865 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 XP_005265401 15 9605 XP_005265400 15 9605 XP_005265399 15 9605 XP_006713335 15 9605>NP_005179 Length = 906 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 224 LKSTIDLTC 232>NP_733762 Length = 982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 216 LKSTIDLTC 224>XP_006713860 Length = 914 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 244 LKSTIDLTC 252>XP_006713859 Length = 966 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 244 LKSTIDLTC 252>XP_005247910 Length = 982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 216 LKSTIDLTC 224>XP_005247909 Length = 1010 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 LKSTI LTC Sbjct: 244 LKSTIDLTC 252>NP_001034568 Length = 823 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIVLTC 9 ST+VLTC Sbjct: 175 STLVLTC 181>XP_005268301 Length = 662 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIVLTC 9 ST+VLTC Sbjct: 14 STLVLTC 20>XP_006720407 Length = 813 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIVLTC 9 ST+VLTC Sbjct: 165 STLVLTC 171>NP_057313 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_006718315 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253032 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_006718314 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253031 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_006718313 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253030 Length = 336 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST++L C Sbjct: 302 KSTLILVC 309>NP_085143 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST+V TC Sbjct: 139 KSTLVPTC 146>XP_006719218 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 KST+V TC Sbjct: 139 KSTLVPTC 146>NP_000724 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIVLTC 9 +T++LTC Sbjct: 43 TTVILTC 49>NP_057092 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_056337 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 K+TI+L C Sbjct: 44 KTTIILRC 51>XP_005264422 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 K+TI+L C Sbjct: 44 KTTIILRC 51>XP_005264421 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_001180393 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_061921 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKSTIVLTC 9 LKST++ C Sbjct: 183 LKSTVISRC 191>NP_006436 Length = 2335 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KSTIVLTC 9 + TI++TC Sbjct: 2209 EKTIIITC 2216>NP_660339 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T+VLTC Sbjct: 240 TLVLTC 245>NP_065744 Length = 2113 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIVLTC 9 ST++L+C Sbjct: 390 STVILSC 396>NP_112536 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T++LTC Sbjct: 164 TVILTC 169>NP_001273660 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 ++STI+L C Sbjct: 1 MRSTILLFC 9>NP_997722 Length = 209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKSTIVLTC 9 ++STI+L C Sbjct: 1 MRSTILLFC 9>XP_005258677 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T+VLTC Sbjct: 240 TLVLTC 245>XP_005246710 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKSTIVLTC 9 LKST++ C Sbjct: 183 LKSTVISGC 191>NP_001106881 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T++LTC Sbjct: 42 TVILTC 47>NP_002776 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T++LTC Sbjct: 164 TVILTC 169>NP_976032 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 T++LTC Sbjct: 42 TVILTC 47>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 TIV+TC Sbjct: 230 TIVVTC 235>NP_000307 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 407 LKSTLVL 413>NP_001171673 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 407 LKSTLVL 413>NP_055598 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KSTIVLTC 9 K+T++L+C Sbjct: 154 KATLLLSC 161>NP_955389 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KSTIVLTC 9 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_006725628 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KSTIVLTC 9 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_006725627 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KSTIVLTC 9 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_005254865 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KSTIVLTC 9 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 TIV+TC Sbjct: 255 TIVVTC 260>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 TIV+TC Sbjct: 230 TIVVTC 235>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 TIV+TC Sbjct: 252 TIVVTC 257>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TIVLTC 9 TIV+TC Sbjct: 255 TIVVTC 260>XP_005265401 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 376 LKSTLVL 382>XP_005265400 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 389 LKSTLVL 395>XP_005265399 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 407 LKSTLVL 413>XP_006713335 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKSTIVL 7 LKST+VL Sbjct: 420 LKSTLVL 426Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,200 Number of extensions: 567 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |