Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138502 17 2528 NP_006026 17 3301 XP_005268287 17 3301 XP_005268286 17 3301 XP_005268285 17 3301 XP_005268284 17 3301 NP_444256 17 4312 NP_444254 17 4312 NP_444253 17 4312 NP_444255 17 4312 NP_056175 17 4312 XP_005247551 17 4312 XP_005247550 17 4312 XP_006713712 17 4312 XP_005247549 17 4312 NP_004475 16 5631 NP_001158089 16 5631 NP_001010888 16 7355 NP_001273290 16 7355 NP_001273289 16 7355 NP_001157787 16 7355 NP_079466 16 7355 XP_003960344 16 7355 XP_005262317 16 7355 XP_006712951 16 7355 XP_006712731 16 7355 XP_006712730 16 7355 XP_006712729 16 7355 XP_006712728 16 7355 XP_006712727 16 7355 XP_006712726 16 7355 XP_006712725 16 7355 XP_006712724 16 7355 XP_005264052 16 7355 XP_005263995 16 7355 XP_006712580 16 7355 XP_005263994 16 7355 XP_006712579 16 7355 XP_006712578 16 7355 XP_006712577 16 7355 XP_006710197 16 7355 NP_005870 16 7355 NP_005723 15 9605 NP_955374 15 9605 NP_037490 15 9605>NP_001138502 Length = 1692 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LKSASKELK 9 L+SAS+ELK Sbjct: 471 LRSASEELK 479>NP_006026 Length = 1711 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKS +KELK Sbjct: 556 LKSQAKELK 564>XP_005268287 Length = 1490 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKS +KELK Sbjct: 556 LKSQAKELK 564>XP_005268286 Length = 1685 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKS +KELK Sbjct: 556 LKSQAKELK 564>XP_005268285 Length = 1702 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKS +KELK Sbjct: 556 LKSQAKELK 564>XP_005268284 Length = 1728 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKS +KELK Sbjct: 556 LKSQAKELK 564>NP_444256 Length = 1794 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 990 LKSASKE 996>NP_444254 Length = 1845 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 990 LKSASKE 996>NP_444253 Length = 1914 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1059 LKSASKE 1065>NP_444255 Length = 1863 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1059 LKSASKE 1065>NP_056175 Length = 1042 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 +KSA +ELK Sbjct: 832 IKSAKRELK 840>XP_005247551 Length = 1855 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1000 LKSASKE 1006>XP_005247550 Length = 1856 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1069 LKSASKE 1075>XP_006713712 Length = 1923 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1069 LKSASKE 1075>XP_005247549 Length = 1924 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKSASKE 7 LKSASKE Sbjct: 1069 LKSASKE 1075>NP_004475 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 L+SAS ELK Sbjct: 93 LQSASMELK 101>NP_001158089 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 L+SAS ELK Sbjct: 93 LQSASMELK 101>NP_001010888 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KSASKELK 9 KSASKE K Sbjct: 14 KSASKEEK 21>NP_001273290 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KSASKELK 9 KSA++ELK Sbjct: 41 KSAAEELK 48>NP_001273289 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KSASKELK 9 KSA++ELK Sbjct: 41 KSAAEELK 48>NP_001157787 Length = 1941 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1507 LKSAEVELK 1515>NP_079466 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 919 LKSAEVELK 927>XP_003960344 Length = 2085 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1651 LKSAEVELK 1659>XP_005262317 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KSASKELK 9 KSASKE K Sbjct: 14 KSASKEEK 21>XP_006712951 Length = 2119 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1685 LKSAEVELK 1693>XP_006712731 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 668 LKSAEVELK 676>XP_006712730 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 672 LKSAEVELK 680>XP_006712729 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 687 LKSAEVELK 695>XP_006712728 Length = 1307 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 873 LKSAEVELK 881>XP_006712727 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 885 LKSAEVELK 893>XP_006712726 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 885 LKSAEVELK 893>XP_006712725 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 918 LKSAEVELK 926>XP_006712724 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 919 LKSAEVELK 927>XP_005264052 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 919 LKSAEVELK 927>XP_005263995 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 948 LKSAEVELK 956>XP_006712580 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 948 LKSAEVELK 956>XP_005263994 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1062 LKSAEVELK 1070>XP_006712579 Length = 1865 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1480 LKSAEVELK 1488>XP_006712578 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1480 LKSAEVELK 1488>XP_006712577 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1481 LKSAEVELK 1489>XP_006710197 Length = 1836 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKSA ELK Sbjct: 1402 LKSAEVELK 1410>NP_005870 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKSASKELK 9 LKSA K+L+ Sbjct: 250 LKSAQKDLQ 258>NP_005723 Length = 1312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKSASKELK 9 LKS + ELK Sbjct: 863 LKSTTNELK 871>NP_955374 Length = 66 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSASKELK 9 KSA +ELK Sbjct: 25 KSAQQELK 32>NP_037490 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SASKELK 9 +ASKELK Sbjct: 82 TASKELK 88Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.107 0.227 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 372,499 Number of extensions: 364 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |